☆33Nov 30, 2023Updated 2 years ago
Alternatives and similar repositories for pubtator-gpt
Users that are interested in pubtator-gpt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PhenoTagger☆66Jan 24, 2024Updated 2 years ago
- ☆29Feb 23, 2026Updated 5 months ago
- Data structures and code to read/write BioC XML and Json.☆34Aug 21, 2023Updated 2 years ago
- ☆47May 17, 2025Updated last year
- ☆35Jun 26, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- AIONER☆70Jul 25, 2024Updated 2 years ago
- The Agentic BioML Challenge + AutoBioML framework☆18Jun 3, 2025Updated last year
- Python Client Library for the G2P Portal API☆15May 20, 2026Updated 2 months ago
- Code and data for GeneGPT.☆428May 8, 2025Updated last year
- RENET2: High-Performance Full-text Gene-Disease Relation Extraction with Iterative Training Data Expansion☆29Jan 30, 2022Updated 4 years ago
- This is the repo for CROssBARv2 Knowledge Graph data. CROssBARv2 is a heterogeneous general-purpose biomedical KG-based system.☆15Aug 10, 2026Updated last week
- SNP Extraction Tool for Human Variations☆27Feb 21, 2024Updated 2 years ago
- template for rmarkdown based scientific report website☆11Feb 10, 2017Updated 9 years ago
- HyPe: Better Pre-trained Language Model Fine-tuning with Hidden Representation Perturbation [ACL 2023]☆14Jul 11, 2023Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Connecting AI to biomedical data☆15May 14, 2026Updated 3 months ago
- ☆10Updated this week
- Grounding of biomedical named entities with contextual disambiguation☆54Jun 29, 2026Updated last month
- Python package for biodatafuse project.☆15Apr 22, 2026Updated 3 months ago
- A stitching platform for InXight☆15Jun 12, 2026Updated 2 months ago
- A collection of algorithms done in JavaScript with visual demos☆11Apr 17, 2023Updated 3 years ago
- R Fundamentals for Biologists☆33Jan 25, 2025Updated last year
- ☆33Mar 15, 2025Updated last year
- Differential gene expression analysis on RNA-seq data☆13Apr 26, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Gene expression viewer template☆12Aug 30, 2017Updated 8 years ago
- ☆12Jun 16, 2023Updated 3 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆22Updated this week
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Jun 10, 2024Updated 2 years ago
- ☆13Jun 6, 2024Updated 2 years ago
- A benchmark on predicting how small molecules change gene expression in different cell types.☆18Jul 4, 2025Updated last year
- Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for v…☆21Feb 18, 2026Updated 6 months ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 7 years ago
- AI agents + toolkits for scientific knowledge☆42Jul 17, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆13Updated this week
- ☆10Dec 8, 2021Updated 4 years ago
- Spacewalk is an application for displaying and interacting with super-resolution chromatin tracing data in 3D. SpaceWalk includes igv.js …☆12Nov 8, 2025Updated 9 months ago
- Bad link reporter for GitHub repositories☆13Aug 3, 2026Updated 2 weeks ago
- ☆11Jul 8, 2024Updated 2 years ago
- An ontology for describing the phenology of individual plants and populations of plants, and for integrating plant phenological data acro…☆19May 6, 2026Updated 3 months ago
- GitHub pages for GPML-Repo☆12Updated this week