amorison / qjobsLinks
qstat wrapper
☆17Updated 5 years ago
Alternatives and similar repositories for qjobs
Users that are interested in qjobs are comparing it to the libraries listed below
Sorting:
- TeraPCA is a multithreaded C++ software suite based on Intel's MKL library (or any other BLAS and/or LAPACK distribution). TeraPCA featur…☆15Updated 3 years ago
- SODAR: System for Omics Data Access and Retrieval☆19Updated this week
- Trigger the Google Genomics Pipeline API with CWL☆11Updated 8 years ago
- Build and deploy Singularity containers to GitHub releases, and pull with the singularity-hpc client☆17Updated 2 years ago
- DEvis: an R package for aggregation and visualization of differential expression data☆20Updated 5 years ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Updated last year
- Import a CWL workflow specification to Nextflow script (experimental)☆27Updated 7 years ago
- International BioHackathon Directory of Events, Projects and Communities☆12Updated 6 months ago
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- Ansible playbooks for Galaxy Server deployment☆24Updated 3 months ago
- MuSiCa - Mutational Signatures in Cancer☆23Updated 2 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago
- A demo and tutorial for how to use git and singularity to make your research more portable and reproducible☆26Updated 9 years ago
- ☆17Updated 2 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated last year
- FAstqc DAta PArser - A minimal parser to parse FastQC output data.☆16Updated 9 years ago
- Misc. utilities☆11Updated 6 years ago
- An ATAC-seq pipeline wrapped in NextFlow that can be run by Jupyter☆14Updated 7 years ago
- example singularity definition files and demos☆28Updated 7 years ago
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Updated 6 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated 2 years ago
- Proof of concept to use ansible + Lmod to deploy a bioinformatics server☆24Updated 7 months ago
- Stupid Simple Elastic Compute Cloud☆16Updated 2 years ago
- A unified array job submitter for LSF, SGE/UGE and Slurm☆32Updated last year
- ☆28Updated 7 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- Code for Russell et al. "A large-scale analysis of bioinformatics code on GitHub"☆34Updated 6 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Updated 4 years ago
- Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure☆12Updated last year