Integrating Ribo-SEQ Upstream and Downstream Analysis
☆11Oct 14, 2024Updated last year
Alternatives and similar repositories for RiboProfiler
Users that are interested in RiboProfiler are comparing it to the libraries listed below
Sorting:
- Profile and Heatmap Visualization by Using ggplot2 and grid☆12Nov 21, 2023Updated 2 years ago
- Extract Sequence from Genome According to Annotation File☆39Apr 16, 2025Updated 10 months ago
- funny geom/stat functions for visualization☆11Aug 30, 2023Updated 2 years ago
- ☆22Dec 13, 2025Updated 2 months ago
- Creating Circular Graph with the Grammar of GGplot2☆21Jan 5, 2024Updated 2 years ago
- An R package to visualize bigwigs.☆32Jul 5, 2022Updated 3 years ago
- Visualizing SingleCell data Using GGplot2☆36Sep 28, 2024Updated last year
- A comprehensive pipeline for Ribo-seq data analysis☆11Jun 27, 2025Updated 8 months ago
- 用每个窗口的read数作为特征、胎儿浓度作为标签,训练神经网络模型;训练完成的神经网络模型可用于NIPT胎儿浓度的预测☆11Jun 10, 2022Updated 3 years ago
- Minimal scripts to reproduce the RADICL-seq analysis of the Nature Communications manuscript☆11Jan 30, 2020Updated 6 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆15Nov 20, 2025Updated 3 months ago
- Model-based analysis of APA using 3' end-linked reads☆12Aug 14, 2021Updated 4 years ago
- public production version of sequin to share with the public☆11Jan 6, 2025Updated last year
- FOR my learing☆12Feb 19, 2026Updated last week
- A Package for Ribosome Profiling Data Analysis☆18Jan 17, 2026Updated last month
- A copy of RiboTaper v1.2☆10Mar 14, 2021Updated 4 years ago
- SNP and indel calls from multiple sequence alignment (MSA)☆13Nov 11, 2022Updated 3 years ago
- Use batch balanced KNN (BBKNN) in R☆13Sep 9, 2025Updated 5 months ago
- 🌓 Allele specific analyses across cell states and conditions☆10Nov 28, 2022Updated 3 years ago
- Bayesian-based fetal genotyping using maternal cell-free DNA and parental sequencing data.☆14Jun 5, 2019Updated 6 years ago
- Seqscope codes☆11Nov 28, 2021Updated 4 years ago
- ☆10Jul 10, 2023Updated 2 years ago
- extract gene TSS/TES site form gencode/ensembl/gencode database GTF file and export bed format file.☆11Jan 24, 2022Updated 4 years ago
- ☆15Dec 11, 2022Updated 3 years ago
- A framework around Tensorflow-Keras that makes it easy to train and evaluate any deep learning architecture on imaging flow cytometry dat…☆12Dec 8, 2022Updated 3 years ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆12Jun 21, 2024Updated last year
- extract gene TSS site form gencode/ensembl/gencode database GTF file and export bed format file.☆12Jan 24, 2022Updated 4 years ago
- MR project investigating the mediating role of mammographic density in the childhood body size and breast cancer relationship☆11May 14, 2024Updated last year
- A tool for sample swap identification in high throughput sequencing studies☆10Mar 4, 2025Updated 11 months ago
- One-step to Cluster and Visualize Gene Expression Matrix☆355Jan 27, 2026Updated last month
- Genome databases generation pipeline for ngs.plot and region_analysis.☆18Sep 8, 2015Updated 10 years ago
- Anti-Cancer Peptide Prediction with Deep Representation Learning Features☆11Jan 27, 2021Updated 5 years ago
- ☆19Jul 28, 2025Updated 7 months ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆12Dec 2, 2024Updated last year
- PoGo is a proteogenomic tool which allows mapping of peptides identified through mass spectrometry to a reference genome through provided…☆12Jul 8, 2021Updated 4 years ago
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- Processing and analysis of proteomics data☆17Feb 19, 2026Updated last week
- Useful functions to make your scRNA-seq plot more cool!☆374Dec 24, 2025Updated 2 months ago
- List and download schemes from pubMLST.org and other BIGSDB servers☆10Oct 14, 2024Updated last year