junjunlab / RiboProfilerLinks
Integrating Ribo-SEQ Upstream and Downstream Analysis
☆11Updated 11 months ago
Alternatives and similar repositories for RiboProfiler
Users that are interested in RiboProfiler are comparing it to the libraries listed below
Sorting:
- An elegant package to visualize gene structures☆81Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated 2 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- extract gene TSS/TES site form gencode/ensembl/gencode database GTF file and export bed format file.☆10Updated 3 years ago
- ☆84Updated last year
- Basic workflow for ATAC-seq analysis☆84Updated last year
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 5 years ago
- The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …☆89Updated 2 years ago
- Extract gene length based on featureCount calculation gene nonredundant exon length method.☆17Updated 3 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- An integrated platform for modeling gene-regulatory dynamics and networks☆32Updated last year
- SNV calling from single cell sequencing☆106Updated 10 months ago
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- ☆31Updated 2 years ago
- ☆88Updated 4 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆51Updated last year
- Analysis pipeline for ATAC-seq data☆76Updated last year
- An R package to visualize bigwigs.☆31Updated 3 years ago
- Install GISTIC2 by one line code; GISTIC2 docker image☆42Updated 2 years ago
- release version☆54Updated 3 years ago
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆111Updated 2 weeks ago
- ☆115Updated 2 weeks ago
- Transcriptomics Visualization R package.☆74Updated 5 months ago
- Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data☆12Updated 2 years ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 4 years ago
- ☆85Updated 2 weeks ago
- Analyses of Ribo-seq rRNA fragments for Differential Ribosome Heterogeneity and Collision predictions☆11Updated last month
- Links to ATAC-seq analysis tools☆70Updated 4 years ago
- Tutorial Website☆59Updated 4 years ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆68Updated this week