ms609 / TreeToolsLinks
Create, modify and analyse phylogenetic trees in R
☆23Updated 2 weeks ago
Alternatives and similar repositories for TreeTools
Users that are interested in TreeTools are comparing it to the libraries listed below
Sorting:
- phylogenetic networks using ggplot2 and ggtree☆11Updated 3 months ago
- BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)☆14Updated last year
- Perform phylogenetic path analysis in R.☆13Updated 4 months ago
- a take on ordination plots using ggplot2☆65Updated last year
- Dendrograms for Evolutionary Analysis☆12Updated 6 years ago
- babette is an R package to work with BEAST2☆46Updated last month
- taxonomy R packages☆44Updated last year
- A Toolbox for Manipulating Biological Sequences in R☆26Updated 3 months ago
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆20Updated 2 months ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆25Updated 5 months ago
- Interface to Open Tree of Life API☆46Updated last week
- Phylogenetic Comparative Tools for Missing Data and Within-Species Variation☆32Updated 3 years ago
- ☆18Updated 4 years ago
- R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecula…☆11Updated 7 months ago
- ☆36Updated last year
- provide extra layers for ggplot2☆36Updated 7 months ago
- population genetic simulations with R and Shiny☆28Updated last year
- phylogenetic networks using ggplot2 and ggtree☆13Updated last year
- ☆23Updated this week
- A template for creating modular shiny applications that meet academic standards and are reproducible☆29Updated 3 months ago
- rtrees: an R package to assemble phylogenetic trees from mega-trees☆36Updated 5 months ago
- Functions for phylogenetic analyses☆36Updated 2 months ago
- Ordination lectures for Ecological Methods in Oulu☆22Updated last year
- An R pakage to calculate diversity through Hill Numbers☆36Updated 2 months ago
- Seamless Integration of BLAST Sequence Searches in R☆30Updated 2 years ago
- An R package for the spatial analysis of population genetic data.☆20Updated 6 months ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Updated last year
- R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2☆13Updated last month
- Computes affinity between two entities based on their co-occurrence☆28Updated 6 months ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 7 years ago