ms609 / TreeToolsLinks
Create, modify and analyse phylogenetic trees in R
☆23Updated 2 weeks ago
Alternatives and similar repositories for TreeTools
Users that are interested in TreeTools are comparing it to the libraries listed below
Sorting:
- BLAST-like algorithm for R based on the nsearch library (https://github.com/stevschmid/nsearch)☆14Updated last year
- phylogenetic networks using ggplot2 and ggtree☆11Updated last month
- Perform phylogenetic path analysis in R.☆13Updated 3 months ago
- a take on ordination plots using ggplot2☆65Updated last year
- Dendrograms for Evolutionary Analysis☆11Updated 6 years ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆25Updated 4 months ago
- provide extra layers for ggplot2☆36Updated 6 months ago
- A Toolbox for Manipulating Biological Sequences in R☆26Updated 2 months ago
- taxonomy R packages☆43Updated last year
- A template for creating modular shiny applications that meet academic standards and are reproducible☆29Updated last month
- babette is an R package to work with BEAST2☆46Updated last month
- Interface to Open Tree of Life API☆45Updated 2 years ago
- Compute various quantitative genetics parameters from a Generalised Linear Mixed Model (GLMM) estimates. Especially, it yields the observ…☆16Updated 10 months ago
- R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecula…☆11Updated 5 months ago
- asremlPlus is an R package that augments the use of 'ASReml-R' and 'ASReml4-R' in fitting mixed models☆20Updated last month
- Phylogenetic Comparative Tools for Missing Data and Within-Species Variation☆32Updated 2 years ago
- Ordination lectures for Ecological Methods in Oulu☆21Updated last year
- Phylogenetic ANalyses of DiversificAtion☆25Updated 2 weeks ago
- Computes affinity between two entities based on their co-occurrence☆28Updated 5 months ago
- taxonomic classes for R☆50Updated 4 months ago
- This repo contains the code for a shiny app that allows for visualization of subset phylogenetic trees☆15Updated 6 years ago
- ☆18Updated 4 years ago
- phylogenetic networks using ggplot2 and ggtree☆13Updated 11 months ago
- A package containing several useful R-functions for reading and plotting the results of Birth-Death Skyline (BDSKY) runs in BEAST2.☆11Updated 7 years ago
- Development version of vioplot R package (CRAN maintainer)☆28Updated 9 months ago
- An R pakage to calculate diversity through Hill Numbers☆35Updated last month
- An R package for the spatial analysis of population genetic data.☆20Updated 5 months ago
- ☆36Updated last year
- ☆16Updated last year
- useful functions for ggplot☆18Updated 4 months ago