thej022214 / corHMMLinks
Fits a generalized form of the covarion model that allows different transition rate classes on different portions of a phylogeny by treating rate classes as “hidden” states in a Markov process.
☆13Updated 3 weeks ago
Alternatives and similar repositories for corHMM
Users that are interested in corHMM are comparing it to the libraries listed below
Sorting:
- Exploring the Phylogenetic Signal in Continuous Traits☆18Updated 3 months ago
- R package for simulating fossil data on phylogenetic trees under mechanistic models of preservation and sampling☆11Updated last week
- Bayesian species delimitation integrating genes and traits☆12Updated 4 years ago
- Compilation of tutorials for RevBayes☆22Updated 7 years ago
- DPPDIV☆12Updated 5 years ago
- A birth-death-hybridization based phylogenetic network simulator.☆11Updated last year
- Machuruku☆32Updated 8 months ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated last year
- babette is an R package to work with BEAST2☆46Updated last month
- population genetic simulations with R and Shiny☆28Updated 11 months ago
- A textbook for phylogenetic comparative methods.☆44Updated 6 years ago
- This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Provid…☆14Updated 6 years ago
- R package to run BEAST2☆11Updated last month
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆70Updated 6 months ago
- 🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction☆71Updated 3 weeks ago
- A book for teaching people how to do comparative methods in R☆22Updated 2 years ago
- Species occurrence dot maps in R☆21Updated 3 years ago
- An R Package to build and simulate coalescent models☆20Updated 2 weeks ago
- ☆26Updated 4 years ago
- ☆36Updated 11 months ago
- Examples of application of comparative methods in R☆60Updated 3 years ago
- R tools for posterior analyses using BEAST☆20Updated 6 years ago
- Detection of evolutionary shifts in Ornstein-Uhlenbeck models☆20Updated 3 years ago
- package for interacting with the chromosome counts database (CCDB) at https://taux.evolseq.net/CCDB_web/☆12Updated 2 months ago
- Phylogenetic ANalyses of DiversificAtion☆24Updated 3 weeks ago
- R We There Yet?☆31Updated 6 months ago
- A program for multimodel inference on speciation and trait evolution☆34Updated 8 years ago
- Population Assignment using Genetic, Non-genetic or Integrated Data in a Machine-learning Framework. Methods in Ecology and Evolution.…☆16Updated 3 weeks ago
- method for modeling continuous and discrete population genetic structure☆36Updated last year
- R package: Evolutionary biology in R☆18Updated last week