thej022214 / corHMM
Fits a generalized form of the covarion model that allows different transition rate classes on different portions of a phylogeny by treating rate classes as “hidden” states in a Markov process.
☆13Updated 3 weeks ago
Alternatives and similar repositories for corHMM:
Users that are interested in corHMM are comparing it to the libraries listed below
- An R Package to build and simulate coalescent models☆20Updated last year
- Exploring the Phylogenetic Signal in Continuous Traits☆16Updated last year
- ☆26Updated 4 years ago
- Bayesian species delimitation integrating genes and traits☆12Updated 3 years ago
- A birth-death-hybridization based phylogenetic network simulator.☆11Updated 6 months ago
- DPPDIV☆12Updated 5 years ago
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated 10 months ago
- Fast and simple simulation-based population genetic inference in R☆27Updated last month
- Phylogenetic penalized likelihood☆47Updated 9 months ago
- Machuruku☆31Updated 3 months ago
- the hierfstat package☆24Updated 5 months ago
- Species occurrence dot maps in R☆21Updated 3 years ago
- Compilation of tutorials for RevBayes☆22Updated 6 years ago
- Phylogenetic ANalyses of DiversificAtion☆24Updated 3 months ago
- R package to run BEAST2☆11Updated last week
- BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts☆66Updated last month
- This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Provid…☆13Updated 5 years ago
- A program for multimodel inference on speciation and trait evolution☆33Updated 7 years ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Updated 4 years ago
- Workflow to detect and phase hybrids in target capture data☆19Updated 2 years ago
- Detection of evolutionary shifts in Ornstein-Uhlenbeck models☆19Updated 2 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 7 months ago
- initial commit☆26Updated 2 years ago
- Process MS results in R, in a tidy way☆17Updated 6 years ago
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- Python version of PHLAWD☆21Updated 5 months ago
- babette is an R package to work with BEAST2☆45Updated 2 weeks ago
- stackr: an R package to run stacks software pipeline☆29Updated 3 weeks ago
- A textbook for phylogenetic comparative methods.☆43Updated 5 years ago