moyn413 / nifHdada2Links
dada2 formatted nifH database
☆12Updated last year
Alternatives and similar repositories for nifHdada2
Users that are interested in nifHdada2 are comparing it to the libraries listed below
Sorting:
- This is a collection of scripts for analyzing mixed 16S/18S amplicon sequences using tools such as qiime2, DADA2, deblur, and bbtools☆34Updated last month
- Dissimilarity Overlap Curve analysis☆11Updated 2 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆86Updated last week
- Various functions for analysis of microbial community data☆46Updated last week
- Fantaxtic - Nested Bar Plots for Phyloseq Data☆32Updated last year
- Code for running analyses carried out in Stegen et al. 2013, ISME☆30Updated 7 years ago
- ☆50Updated 4 years ago
- DiTing: A pipeline to infer and compare biogeochemical pathways in metagenomic data☆47Updated 10 months ago
- ☆40Updated last year
- R scripts for performing co-occurrence analyses☆34Updated 10 years ago
- An R package for removing contamination from metabarcoding (e.g., microbiome) datasets post-sequencing☆18Updated last year
- Utilities for community ecology analysis☆19Updated 5 years ago
- ☆23Updated 6 years ago
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆72Updated 3 years ago
- SourceTracker2☆80Updated last year
- MetaCompare☆19Updated last year
- This is a comprehensive database for fast and accurately analyzing the phosphorus cycling genes.☆31Updated 3 years ago
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆71Updated last year
- ☆39Updated 6 months ago
- ☆78Updated last year
- FUNGuild: parsing OTUs into functional guilds☆120Updated last year
- MaAsLin3: Microbiome Multivariate Association with Linear Models☆47Updated last week
- Growth Rate Index (GRiD) measures bacterial growth rate from reference genomes (including draft quality genomes) and metagenomic bins at …☆31Updated 5 years ago
- Compare microbial co-occurrence networks based on the trans_network class of microeco package☆11Updated 4 months ago
- Transform files to the microtable object with microeco package☆28Updated last month
- ☆12Updated last year
- Amplicon sequencing pipelines suitable for SSU (16S, 18S), LSU (23S, 28S) and ITS.☆53Updated 3 months ago
- ☆55Updated last month
- ☆34Updated 4 months ago
- R tools for reconstructing metabolisms.☆14Updated 3 weeks ago