gnanibioinfo / EzMAPLinks
☆11Updated 4 years ago
Alternatives and similar repositories for EzMAP
Users that are interested in EzMAP are comparing it to the libraries listed below
Sorting:
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆15Updated 3 years ago
- ☆13Updated 8 years ago
- Dadaist2 🟨 Highway to R☆13Updated 9 months ago
- ☆18Updated last year
- A quick workflow to get researchers started with the bioinformatic pipeline used in the Environmental Metagenomics program.☆12Updated 10 months ago
- Protocols, data and code associated with the MK-SpikeSeq method for quantifying the absolute abundances of microbiota samples☆12Updated 4 years ago
- ☆18Updated 2 years ago
- Plot microbiome time series in parallel☆27Updated 2 years ago
- ISCompare, an opensource program to identify Differentially Located Insertion Sequences☆13Updated last year
- Snakemake workflow to map and quantify microbial genomes in metagenomic reads☆13Updated 2 months ago
- Tool for constructing phylogenies and summarizing metabolic characteristics based on curated and custom profile HMMs☆17Updated 3 years ago
- Calculate assocations between genes and traits☆29Updated 9 months ago
- Population genomics from metagenomes☆12Updated last year
- ☆18Updated 3 years ago
- MAG Circularization Method☆32Updated last month
- scripts for microbiome analysis☆11Updated last year
- Three bacterial GWAS methods all rolled into one easy-to-use R package☆22Updated last year
- Prediction of microbial interactions in complex communities☆11Updated last year
- Phylogeny Enhanded Prediction of PAN-genome☆43Updated 5 years ago
- Phylogenetic Organization of Metagenomic Signals (POMS)☆18Updated 3 years ago
- Pipeline for metagenome and metatranscriptome joint assembly☆21Updated 2 years ago
- SynTracker is a pipeline, designated to determine the biological relatedness of conspecific strains (microbial strains of the same specie…☆38Updated 3 months ago
- Extract metadata from biosamples in NCBI☆16Updated 4 years ago
- R package for microbial pangenomics☆24Updated 3 years ago
- ☆28Updated last week
- Pipeline for Reproducible and Scalable Integration of Metagenomic and Metatranscriptomic Data☆17Updated 3 weeks ago
- A Hierarchical Approach to Pangenomics Inference☆13Updated last year
- Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health during the last decade. Here we determined the risk…☆19Updated 3 years ago
- A functional profiler for metagenomes using FracMinHash☆20Updated 5 months ago
- pipeline for read mapping, snp calling and annotation for bacterial genomes☆13Updated last year