kuanrongchan / STAGESLinks
β36Updated 7 months ago
Alternatives and similar repositories for STAGES
Users that are interested in STAGES are comparing it to the libraries listed below
Sorting:
- πΊ Exploring novel tumor epitope identificationβ36Updated 5 years ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, β¦β33Updated 2 months ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics dataβ¦β62Updated 3 months ago
- A collection of useful functions for bioinformatics data analysisβ25Updated 2 months ago
- Comparison of Adaptive Immune Receptor Repertoiresβ28Updated 8 months ago
- Please consider using/contributing to https://github.com/nf-core/scdownstreamβ26Updated last year
- GREIN : GEO RNA-seq Experiments Interactive Navigatorβ50Updated 6 years ago
- β35Updated 3 years ago
- β41Updated this week
- A continually expanding collection of RNA-seq toolsβ52Updated last week
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browserβ78Updated 2 weeks ago
- Explore and download data from the recount3 projectβ36Updated 2 weeks ago
- Time-Course Multi-Omics data integrationβ25Updated last year
- R tool to analyse and integrate multiple -omics dataβ14Updated 4 months ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.β57Updated last year
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screeningβ26Updated last year
- β19Updated last year
- Quickomics: exploring omics data in an intuitive, interactive and informative manner. Bioinformatics. 2021 Apr 26:btab255.β42Updated last month
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVALβ56Updated 2 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-packageβ36Updated 3 years ago
- β20Updated 3 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Dataβ15Updated 3 years ago
- Snakemake pipeline for running MAJIQβ23Updated last year
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.β29Updated 5 years ago
- A single cell sequencing read simulator.β33Updated 11 months ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq dataβ30Updated 3 years ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditionsβ39Updated 3 years ago
- R package for analysing proteomics dataβ50Updated 2 years ago
- A script to make downloading of SRA/GEO data easierβ31Updated 2 years ago
- DRUGZ softwareβ23Updated 4 years ago