biocorecrg / master_of_poresLinks
Nextflow pipeline for analysis of direct RNA Nanopore reads
☆106Updated 3 weeks ago
Alternatives and similar repositories for master_of_pores
Users that are interested in master_of_pores are comparing it to the libraries listed below
Sorting:
- A tool to identify, orient, trim and rescue full length cDNA reads☆82Updated 3 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads☆108Updated 2 years ago
- ☆98Updated 3 weeks ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆100Updated last month
- BAM Statistics, Feature Counting and Annotation☆150Updated 3 weeks ago
- ☆42Updated 3 weeks ago
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 2 months ago
- Python programs for processing GFF3 files☆98Updated last year
- Research release basecalling models and configurations☆113Updated last month
- Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project☆129Updated 2 weeks ago
- FEELnc : FlExible Extraction of LncRNA☆89Updated 10 months ago
- ☆123Updated 8 months ago
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆114Updated 3 years ago
- Variant Calling Pipeline Using GATK4 and Nextflow☆56Updated 2 years ago
- Tip and tricks for BAM files☆85Updated 6 years ago
- Tools for plotting methylation data in various ways☆155Updated 3 weeks ago
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆170Updated last year
- reference-free transcriptome assembly for short and long reads☆108Updated last year
- Dfam Transposable Element Tools Docker container.☆95Updated 2 weeks ago
- Variant calling tool for long-read sequencing data☆110Updated 3 months ago
- Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data☆141Updated 3 years ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆98Updated 3 months ago
- RNA modifications detection from Nanopore dRNA-Seq data☆85Updated 2 weeks ago
- Detecting contamination in NGS data and multi-species analysis☆76Updated 8 months ago
- ☆130Updated last week
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 4 years ago
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆102Updated 3 weeks ago
- ☆48Updated 10 months ago
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆112Updated last year