imkeller / gscreend
Phenotype detection in pooled genetic perturbation screens
β11Updated last year
Alternatives and similar repositories for gscreend:
Users that are interested in gscreend are comparing it to the libraries listed below
- πΆ hlabud: HLA genotype analysis in Rβ16Updated last month
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seqβ31Updated 4 years ago
- TFregulomeR reveals transcription factorsβ context-specific features and functionsβ16Updated 2 years ago
- Repository for signature genes from Immune Cell Atlasβ18Updated 5 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platformsβ19Updated 2 years ago
- β17Updated 9 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.β28Updated 7 months ago
- AnaLysis routines for ePigenomicS data - π« Bioconductor projectβ16Updated last year
- Create QC and summary reports for Alevin outputβ31Updated 2 months ago
- Interactive benchmarking of ranking and assignment methodsβ14Updated 2 months ago
- A set of tools for accurate quantitation of single-cell allele-specific expressionβ12Updated 2 years ago
- Transcript quantification import with automatic metadata detectionβ67Updated last month
- Modeling and correcting fragment sequence bias for RNA-seqβ24Updated 9 months ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq dataβ29Updated 2 years ago
- R package for haplotype phasing using single-cell RNA-seq dataβ13Updated 7 years ago
- Bioinformatics for Benched Biologistsβ22Updated 4 years ago
- Single Cell multimodal data scripts for downloading datasetsβ17Updated 3 months ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq datasetβ28Updated 5 years ago
- β24Updated 4 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicingβ17Updated last year
- Explore the cancer relevance of your gene listβ50Updated last week
- Template for building a bioconductor workshop package using github actionsβ20Updated 8 months ago
- Isoform-level expression patterns in single-cell RNA-sequencing dataβ11Updated last year
- β19Updated 7 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq dataβ24Updated last year
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.β18Updated 2 months ago
- single-cell and bulk RNA-seq analyses from counts β pathways β drug candidates.β20Updated 4 months ago
- Summary statistics for repertoiresβ16Updated 2 years ago
- HOT regions paperβ11Updated 5 years ago
- R vignettes for processing BUS format single-cell RNA-seq filesβ20Updated 5 years ago