VariantGrid public repo
☆25May 18, 2026Updated this week
Alternatives and similar repositories for variantgrid
Users that are interested in variantgrid are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Generic human DNA variant annotation pipeline☆60Feb 13, 2024Updated 2 years ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 7 months ago
- Sample Contamination Estimate from VCF☆21Nov 6, 2024Updated last year
- Python package for cancer early detection based on a model of cancer evolution and circulating tumor DNA (ctDNA) shedding☆13Jan 8, 2021Updated 5 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Apr 17, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Detection and Visualization of Exon-Level Copy Number Variants in Targeted Next Generation Sequencing Data☆18Nov 26, 2021Updated 4 years ago
- Short reads aligner for NIPT/CNV☆16Oct 10, 2018Updated 7 years ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated last year
- Benchmarking variant calling in polyploids☆16Nov 26, 2021Updated 4 years ago
- VCF files of SVs using long-read sequencing (LRS).☆22Dec 17, 2021Updated 4 years ago
- Browser-based tool for visualizing and analyzing germline copy number variants in genomic data☆11Nov 7, 2024Updated last year
- ONCOCNV - a package to detect copy number changes in Targeted Deep Sequencing and Exome-seq data☆25Oct 30, 2025Updated 6 months ago
- This repository contains information about ongoing analysis performed by GIAB☆14Aug 30, 2019Updated 6 years ago
- Structural Variation breakpoint discovery via adaptive learning☆17Jul 6, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Fast streams for block gzip files.☆14Nov 11, 2025Updated 6 months ago
- ☆35Dec 24, 2020Updated 5 years ago
- Fragmentase Artifact Detection and Elimination☆13Mar 22, 2022Updated 4 years ago
- ☆12Oct 11, 2024Updated last year
- Curated list of resources for variant prioritization☆15Nov 18, 2025Updated 6 months ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50May 8, 2026Updated last week
- Deep Learning based variant calling toolkit - https://clara-parabricks.github.io/VariantWorks/☆48Aug 20, 2025Updated 9 months ago
- A tool that lets you quickly flip through images in a local directory and record notes or answer questions about each one.☆21Jan 4, 2026Updated 4 months ago
- Characterization of Germline variants☆101Mar 15, 2022Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- Extends miniwdl to run workflows on AWS Batch & EFS☆22Feb 5, 2024Updated 2 years ago
- Updated figures for "A benchmarking of WGS-based structural variant callers" paper☆27Apr 3, 2022Updated 4 years ago
- Example client programs for Saphetor's VarSome annotation API☆37Apr 30, 2026Updated 2 weeks ago
- A light-weight HTML lab notebook generator☆18Jun 16, 2023Updated 2 years ago
- ☆29Feb 17, 2021Updated 5 years ago
- LOVD3 development repository☆25Oct 13, 2025Updated 7 months ago
- structural variant database software☆48May 13, 2026Updated last week
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Automated human exome/genome variants detection from FASTQ files☆23Sep 27, 2021Updated 4 years ago
- BrowseVCF is a web-based application and workflow to quickly prioritise disease-causative variants in VCF files.☆47Jun 26, 2020Updated 5 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- Flexible Bayesian inference of mutational signatures☆42Jan 30, 2023Updated 3 years ago
- A library for manipulating bioinformatics sequencing formats in Apache Spark☆33May 6, 2026Updated 2 weeks ago
- Data, results, and code accompanying the manuscript: "Supervised learning is an accurate method for network-based gene classification"☆10Nov 3, 2021Updated 4 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Mar 30, 2021Updated 5 years ago