SACGF / variantgridLinks
VariantGrid public repo
☆24Updated this week
Alternatives and similar repositories for variantgrid
Users that are interested in variantgrid are comparing it to the libraries listed below
Sorting:
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆55Updated this week
- TIDDIT - structural variant calling☆77Updated 7 months ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆18Updated 2 years ago
- Generic human DNA variant annotation pipeline☆59Updated last year
- mtDNA Variant Caller☆35Updated 11 months ago
- (WIP) best-practices workflow for rare disease☆62Updated last year
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Thousand Variant Callers Project Repository☆74Updated 6 years ago
- simple comparison of snakemake, nextflow and cromwell/wdl☆50Updated 5 years ago
- Pipeline to evaluate and validate the accuracy of variant calling methods in genomic research☆36Updated this week
- Portable WDL workflows for IDseq production pipelines☆32Updated 3 years ago
- Workflows for converting between sequence data formats☆39Updated 4 years ago
- Master of Pores 2☆23Updated 11 months ago
- Mutation Identification Pipeline. Read the latest documentation:☆47Updated this week
- ☆44Updated last year
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆34Updated 2 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 9 months ago
- POSTRE: Prediction Of STRuctural variant Effects☆28Updated 9 months ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆58Updated 8 years ago
- Remove primer sequence from BAM alignments by soft-clipping☆31Updated 5 years ago
- Pipeline for structural variant image curation and analysis.☆48Updated 3 years ago
- Simple vcf parser, based on PyVCF☆47Updated 6 years ago
- Web application to collect and visualise data across multiple MultiQC runs.☆95Updated 11 months ago
- conda recipes for genomic data☆84Updated 4 years ago
- List of IARC bioinformatics pipelines and resources☆53Updated 3 weeks ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆52Updated 5 years ago
- Fast sequencing data quality metrics☆31Updated 2 months ago
- A comprehensive cancer DNA/RNA analysis and reporting pipeline☆94Updated this week