genepi / haplogrep3Links
Free mtDNA Haplogroup Classification Service
☆29Updated 4 months ago
Alternatives and similar repositories for haplogrep3
Users that are interested in haplogrep3 are comparing it to the libraries listed below
Sorting:
- Data and information about the Polaris study☆54Updated 5 years ago
 - A tool for visualizing alignments of reads in regions containing tandem repeats☆87Updated last year
 - A suite of tools for detecting expansions of short tandem repeats☆83Updated 2 years ago
 - A tool to genotype CYP2D6 with WGS data☆53Updated 2 years ago
 - Powerful statistics for VCF files☆72Updated 3 months ago
 - mtDNA Variant Caller☆34Updated 10 months ago
 - Ancestry and Kinship Tools☆70Updated 2 years ago
 - ☆95Updated 3 years ago
 - My bioinfo toolbox☆50Updated 8 months ago
 - ClassifyCNV: a tool for clinical annotation of copy-number variants☆68Updated 2 years ago
 - R package designed to simplify structural variant analysis☆73Updated 3 years ago
 - Structural Variant Index☆75Updated 10 months ago
 - TIDDIT - structural variant calling☆77Updated 6 months ago
 - Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆103Updated 4 years ago
 - parallelized blat with multi-threads support☆53Updated 9 months ago
 - Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆18Updated 2 years ago
 - Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆73Updated last year
 - don't get DUP'ed or DEL'ed by your putative SVs.☆106Updated 4 years ago
 - Segmented HAPlotype Estimation and Imputation Tool☆91Updated 2 months ago
 - Tools for the analysis of structural variation in genomes☆81Updated last year
 - Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆82Updated 2 years ago
 - A program to detect denovo-variants using next-generation sequencing data.☆54Updated 5 years ago
 - Visualization and annotation of CNVs from population-scale whole-genome sequencing data☆72Updated 7 years ago
 - AdapterRemoval v2 - rapid adapter trimming, identification, and read merging☆113Updated last week
 - HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.☆77Updated 2 years ago
 - WDL’s and Dockerfiles for assembly QC process☆70Updated 3 months ago
 - Create Bloom filters for a given reference and then use it to categorize sequences☆76Updated 11 months ago
 - An efficient FASTQ manipulation suite☆138Updated 5 years ago
 - VCF-kit: Assorted utilities for the variant call format☆131Updated 3 months ago
 - An awk-like VCF parser☆56Updated last year