Alternatives and similar repositories for miniwdl

Users that are interested in miniwdl are comparing it to the libraries listed below

• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆86Updated 3 weeks ago
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆88Updated 3 weeks ago
• TileDB-Inc / TileDB-VCF
  Efficient variant-call data storage and retrieval library using the TileDB storage library.
  ☆99Updated 3 weeks ago
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated 2 weeks ago
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 7 years ago
• ga4gh / task-execution-schemas
  ☆92Updated last month
• openwdl / learn-wdl
  Educational materials for learning WDL
  ☆130Updated last year
• seqeralabs / nf-tower
  Nextflow Tower system
  ☆151Updated 11 months ago
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆71Updated 2 months ago
• GenomicsDB / GenomicsDB
  High performance data storage for importing, querying and transforming variants.
  ☆99Updated 7 months ago
• nf-core / tools
  Python package with helper tools for the nf-core community.
  ☆285Updated 2 weeks ago
• panoptes-organization / panoptes
  Monitor computational workflows in real time
  ☆74Updated last year
• biocommons / uta
  Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; a…
  ☆71Updated 2 months ago
• iobio / minion
  Server wrapper that turns command line tools into web services
  ☆60Updated 7 years ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆61Updated 2 weeks ago
• bioconda / bioconda-utils
  Utilities for building and managing bioconda recipes
  ☆103Updated last month
• biocommons / hgvs
  Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature…
  ☆286Updated 2 weeks ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆36Updated 7 months ago
• assemblerflow / flowcraft
  FlowCraft: a component-based pipeline composer for omics analysis using Nextflow.
  ☆245Updated 4 months ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆94Updated this week
• ncbi / ngs
  NGS Language Bindings
  ☆120Updated 2 years ago
• g2nb / igv-jupyter
  Extension for Jupyter which integrates igv.js
  ☆154Updated 2 years ago
• dnanexus-rnd / GLnexus
  Scalable gVCF merging and joint variant calling for population sequencing projects
  ☆174Updated last year
• Mizzou-CBMI / COSMOS2
  Python Scientific Pipeline Management System
  ☆71Updated 2 years ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆103Updated 3 months ago
• Illumina / interop
  C++ Library to parse Illumina InterOp files
  ☆80Updated 2 weeks ago
• Clinical-Genomics / scout
  VCF visualization interface
  ☆176Updated 2 weeks ago
• igvteam / igv-webapp
  IGV Web App
  ☆126Updated 2 weeks ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆22Updated 3 years ago
• broadinstitute / wdl-ide
  Rich IDE support for Workflow Description Language
  ☆43Updated 9 months ago