moonso / ped_parserLinks
A python tool for parsing pedigree files
☆16Updated 8 years ago
Alternatives and similar repositories for ped_parser
Users that are interested in ped_parser are comparing it to the libraries listed below
Sorting:
- Variant caller GUI + genetic disease analysis☆22Updated 5 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 8 months ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆28Updated last month
- Allele frequency filtering for Mendelian variant discovery☆18Updated 8 years ago
- Interactive table from gemini output☆10Updated 6 years ago
- conda recipes for genomic data☆85Updated 4 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated 3 weeks ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 8 months ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 6 years ago
- ☆28Updated 6 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- hail-based pipelines for annotating variant callsets and exporting them to elasticsearch☆23Updated last week
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Updated 4 years ago
- Genomic VCF to tab-separated values☆47Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 7 years ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 6 years ago
- ☆24Updated 6 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 6 years ago
- Numerical Encoding for Human Genetic Variants☆41Updated 2 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 3 months ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 2 months ago