moonso / ped_parserLinks
A python tool for parsing pedigree files
☆16Updated 7 years ago
Alternatives and similar repositories for ped_parser
Users that are interested in ped_parser are comparing it to the libraries listed below
Sorting:
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆51Updated 7 months ago
- Variant caller GUI + genetic disease analysis☆22Updated 5 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- Manuscript describing ChronQC is now available online in Bioinformatics☆18Updated 6 years ago
- conda recipes for genomic data☆85Updated 4 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆28Updated last month
- Interactive table from gemini output☆10Updated 6 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 7 months ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- hail-based pipelines for annotating variant callsets and exporting them to elasticsearch☆23Updated last week
- Allele frequency filtering for Mendelian variant discovery☆18Updated 8 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 2 months ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 6 years ago
- ☆43Updated 9 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆40Updated 4 years ago
- create a gemini-compatible database from a VCF☆56Updated 4 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Lollipop-diagram to interactively visualize genetic mutations☆32Updated 10 months ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 5 years ago
- An awk-like VCF parser☆56Updated last year
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 6 years ago
- SEQSpark documentation☆18Updated 4 years ago
- Genomic VCF to tab-separated values☆47Updated 2 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 4 years ago
- The command-line interface to GGD☆43Updated 2 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago