moonso / ped_parserLinks
A python tool for parsing pedigree files
☆16Updated 8 years ago
Alternatives and similar repositories for ped_parser
Users that are interested in ped_parser are comparing it to the libraries listed below
Sorting:
- hail-based pipelines for annotating variant callsets and exporting them to elasticsearch☆23Updated this week
- Variant caller GUI + genetic disease analysis☆22Updated 5 years ago
- CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria☆29Updated this week
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- create a gemini-compatible database from a VCF☆55Updated 4 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 11 months ago
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 7 years ago
- Precursor to SnakeChunks, see https://github.com/SnakeChunks/SnakeChunks. This project has moved and will no longer be edited here.☆11Updated 8 years ago
- Import and run CWL workflows on DNAnexus (alpha)☆13Updated 7 years ago
- Allele frequency filtering for Mendelian variant discovery☆18Updated 9 years ago
- LIkelihood Ratio Interpretation of Clinical AbnormaLities☆31Updated last week
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆30Updated 4 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- conda recipes for genomic data☆84Updated 4 years ago
- gnomAD browser pre-ASHG 2018☆33Updated 5 years ago
- Allele frequency filter app☆14Updated 3 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 11 months ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- ☆43Updated 9 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated 3 months ago
- Interactive table from gemini output☆10Updated 6 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- Malleable All-seeing Journal Of Research Artifacts☆35Updated 2 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 6 years ago
- PathOS is a clinical application for filtering, analysing and reporting on NGS variants☆29Updated 4 years ago
- ☆36Updated 5 years ago
- ALOFT, the Annotation Of Loss-of-Function Transcripts, provides extensive functional annotations to loss-of-function variants in the hum…☆19Updated 6 years ago
- ☆28Updated 8 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 5 years ago