Alternatives and similar repositories for ml-for-genomics

Users that are interested in ml-for-genomics are comparing it to the libraries listed below

• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆51Updated 2 years ago
• kundajelab / training_camp
  Genetics training camp
  ☆21Updated 5 years ago
• kkaneda / bioinformatics_learning
  Bioinformatics learning (for high performance computing, big data, and machine learning)
  ☆19Updated 8 years ago
• OmnesRes / onco_lnc
  ☆35Updated 9 years ago
• lehtiolab / proteogenomics-analysis-workflow
  IPAW: a Nextflow workflow for proteogenomics
  ☆28Updated last year
• VCCRI / Falco
  A quick and flexible single-cell RNA-seq processing framework on the cloud
  ☆39Updated 5 years ago
• babelomics / babelomics
  ☆42Updated 7 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆46Updated 9 years ago
• baoilleach / BioinformaticsPracticals
  Practical Introduction to Bioinformatics and Systems Biology with R (mainly)
  ☆20Updated 15 years ago
• johandahlberg / awesome-10x-genomics
  List of tools and resources related to the 10x Genomics GEMCode/Chromium system
  ☆85Updated 6 years ago
• BIMSBbioinfo / compgen2021
  ☆77Updated 4 years ago
• joan-smith / genomic-features-survival
  Scripts supporting identification of genomic features affecting survival time in cancer
  ☆12Updated 6 years ago
• epiviz / epiviz
  EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…
  ☆71Updated 2 years ago
• ucsd-ccbb / VAPr
  VAPr: A Python package for NoSQL variant data storage, annotation and prioritization
  ☆36Updated 4 years ago
• RCollins13 / HumanIdiogramLibrary
  Resource of human chromosome schematics & images
  ☆95Updated last year
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆42Updated 5 years ago
• NCBI-Hackathons / Community_Software_Tools_for_NGS
  ☆63Updated 9 years ago
• crazyhottommy / machine-learning-resource
  ☆83Updated 11 months ago
• pachterlab / BBB
  Bioinformatics for Benched Biologists
  ☆22Updated 5 years ago
• biostars / biostar-handbook
  Issue tracker for the Biostar Handbook
  ☆64Updated 3 years ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• openvax / neoantigen-vaccine-pipeline
  Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines
  ☆87Updated 2 months ago
• ICGC-TCGA-PanCancer / pcawg_delly_workflow
  A mirror of https://bitbucket.org/weischen/pcawg-delly-workflow
  ☆18Updated 5 years ago
• apierleoni / BioGraPy
  Biological Graphic tool in Python
  ☆34Updated 5 years ago
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 6 years ago
• maxplanck-ie / rna-seq-qc
  Rna-seq pipeline, From FASTQ to differential expression analysis...
  ☆20Updated 8 years ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆50Updated 6 years ago
• ngs-course / ngs-course.github.io
  NGS course
  ☆35Updated 8 years ago
• bcgsc / orca
  Genomics Research Container Architecture
  ☆48Updated 6 years ago
• openvax / topiary
  Predict mutated T-cell epitopes from sequencing data
  ☆30Updated 9 months ago