Alternatives and similar repositories for ml-for-genomics

Users that are interested in ml-for-genomics are comparing it to the libraries listed below

• kkaneda / bioinformatics_learning
  Bioinformatics learning (for high performance computing, big data, and machine learning)
  ☆19Updated 8 years ago
• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆51Updated 2 years ago
• pachterlab / BBB
  Bioinformatics for Benched Biologists
  ☆22Updated 5 years ago
• KHP-Informatics / DNAscan
  DNAscan is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring ve…
  ☆43Updated 3 years ago
• avrilcoghlan / LittleBookofRBioinformatics
  A Little Book of R for Bioinformatics
  ☆52Updated 12 years ago
• kundajelab / training_camp
  Genetics training camp
  ☆21Updated 5 years ago
• ngs-course / ngs-course.github.io
  NGS course
  ☆35Updated 8 years ago
• Ensembl / postgap
  Linking GWAS studies to genes through cis-regulatory datasets
  ☆39Updated 2 years ago
• stevekm / Bioinformatics
  Bioinformatics analysis scripts, workflows, general code examples
  ☆54Updated 4 years ago
• biom262 / cmm262-2020
  Quantitative Methods in Genetics and Genomics Course 2020
  ☆23Updated 5 years ago
• bcgsc / orca
  Genomics Research Container Architecture
  ☆48Updated 6 years ago
• stevetsa / awesome-microbes
  List of computational resources for analyzing microbial sequencing data.
  ☆67Updated last month
• lehtiolab / proteogenomics-analysis-workflow
  IPAW: a Nextflow workflow for proteogenomics
  ☆29Updated last year
• biostars / biostar-handbook
  Issue tracker for the Biostar Handbook
  ☆64Updated 3 years ago
• nellore / rail
  Scalable RNA-seq analysis
  ☆73Updated 4 years ago
• OmnesRes / onco_lnc
  ☆35Updated 9 years ago
• bioinformatics-ca / bioinformatics-ca.github.io
  Student website repo for 2015/2016 Canadian Bioinformatics Workshops
  ☆34Updated 2 years ago
• NCBI-Hackathons / NCBIComputationalCookbook
  Jupyter notebooks to more effectively leverage computational resources at NCBI.
  ☆30Updated 8 years ago
• ewels / clusterflow
  A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
  ☆98Updated 2 years ago
• babelomics / babelomics
  ☆42Updated 7 years ago
• SchlossLab / Topcuoglu_ML_mBio_2020
  Best practices for applying machine learning to bacterial 16S rRNA gene sequencing data
  ☆31Updated 5 years ago
• johandahlberg / awesome-10x-genomics
  List of tools and resources related to the 10x Genomics GEMCode/Chromium system
  ☆86Updated 6 years ago
• maximilianh / crisporPaper
  Code for the CRISPOR article, all data and code to create figures and analysis
  ☆46Updated 9 years ago
• lucapinello / Haystack
  Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline
  ☆31Updated 8 years ago
• GuanLab / Awesome-Bioinformatics
  2018 Recommended Papers to Read in Bioinformatics as Voted by Bioinformaticians
  ☆26Updated 7 years ago
• schatzlab / scikit-ribo
  Accurate estimation and robust modelling of translation dynamics at codon resolution
  ☆21Updated 8 years ago
• gmcvicker / genome
  Python library and scripts for retrieval and storage of genomics data in HDF5 format
  ☆27Updated 6 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆42Updated 5 years ago
• diazale / 1KGP_dimred
  Interactive demonstration of how to use PCA, t-SNE, and UMAP on genotype data from the Thousand Genome Project.
  ☆20Updated 5 years ago
• davek44 / utility
  Computational biology utility scripts
  ☆19Updated 8 months ago