CS273B Deep Learning for Genomics Course Materials
☆36Sep 9, 2020Updated 6 years ago
Alternatives and similar repositories for cs273b
Users that are interested in cs273b are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Docker image for the DeepBind method.☆16Nov 7, 2015Updated 10 years ago
- Deep Feature Interaction Maps (DFIM)☆53Apr 9, 2019Updated 7 years ago
- To be a next-generation DL-based phenotype prediction from genome mutations.☆19May 17, 2021Updated 5 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 7 years ago
- Compute a 2D embedding of a data matrix given supervised class information.☆12Dec 8, 2019Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis☆22Feb 10, 2023Updated 3 years ago
- Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning app…☆165Jun 15, 2022Updated 4 years ago
- A toolkit to learn how to model and interpret regulatory sequence data using deep learning.☆264Aug 1, 2023Updated 3 years ago
- ☆11Apr 25, 2019Updated 7 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61May 26, 2016Updated 10 years ago
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 9 years ago
- A simulation framework to analyze signal flows in complex networks☆15Jun 11, 2026Updated 3 months ago
- Concise: Keras extension for regulatory genomics☆36Dec 26, 2022Updated 3 years ago
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Aug 9, 2017Updated 9 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.☆83Dec 10, 2020Updated 5 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Aug 7, 2018Updated 8 years ago
- Best Practices in Python Packaging☆13Oct 1, 2021Updated 4 years ago
- Downloader for ENCODE☆32Oct 5, 2020Updated 5 years ago
- introduction to dataflow analysis using julia☆14Oct 26, 2020Updated 5 years ago
- Directly create a bigwig file with signal derived from a sorted and indexed bam file.☆11Jul 7, 2017Updated 9 years ago
- NeurIPS17: [AttentiveChrome] Attend and Predict: Using Deep Attention Model to Understand Gene Regulation by Selective Attention on Chrom…☆27Feb 8, 2021Updated 5 years ago
- Spy Agency Teasing☆14Jan 2, 2015Updated 11 years ago
- Selecting features as (network) nodes☆11May 27, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A support vector machine for calling variants from next-gen sequencing data☆15Dec 12, 2013Updated 12 years ago
- Tools for munging genomic data☆21Jul 9, 2019Updated 7 years ago
- a method for CPI and DTA prediction☆11Jun 18, 2022Updated 4 years ago
- Trigger the Google Genomics Pipeline API with CWL☆11Feb 7, 2017Updated 9 years ago
- Parallel Genomic Analysis Toolkit☆14Feb 11, 2019Updated 7 years ago
- a framework for training sequence-level deep learning networks☆403Dec 16, 2024Updated last year
- ☆14Jul 6, 2023Updated 3 years ago
- Using Fastai library to classify Twitter jokes in Spanish☆12Jul 4, 2019Updated 7 years ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆20Nov 18, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 🧛 Deep generative models for TCR sequences 🧛☆17Apr 4, 2022Updated 4 years ago
- DSDE Deep Learning Club☆40Mar 28, 2019Updated 7 years ago
- This is a repo for the Machine Learning Immunogenicity Team in the August 2016 NCBI Hackathon☆25Oct 28, 2016Updated 9 years ago
- ☆11Nov 21, 2022Updated 3 years ago
- ☆106May 16, 2018Updated 8 years ago
- Bootstrap imputation for scRNAseq data☆12Jul 18, 2020Updated 6 years ago
- robust matching of small variant datasets using flexible scoring schemes