Alternatives and similar repositories for cs273b

Users that are interested in cs273b are comparing it to the libraries listed below

• okraus / DeepLoc
  This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content mi…
  ☆50Updated 8 years ago
• p-koo / deepomics
  deep learning toolkit (written on top of tensorflow) to streamline computational biology analysis
  ☆23Updated 2 years ago
• harvardnlp / regulatory-prediction
  Code and Data to accompany "Dilated Convolutions for Modeling Long-Distance Genomic Dependencies", presented at the ICML 2017 Workshop on…
  ☆29Updated 7 years ago
• unlearnai / genemunge
  Tools for munging genomic data
  ☆21Updated 5 years ago
• jmschrei / rambutan
  Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.
  ☆21Updated 6 years ago
• QData / DeepMotif
  Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications
  ☆46Updated 6 years ago
• greenelab / adage
  Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …
  ☆61Updated 9 years ago
• hiranumn / DeepATACseq
  Repository for the code for DeepATAC project presented at WCB workshop in ICML2017
  ☆22Updated 7 years ago
• QData / DeepChrome
  Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications
  ☆63Updated 4 years ago
• dhbradshaw / ml-for-genomics
  Lists open source machine learning projects solving genomic or molecular biology problems.
  ☆29Updated 8 years ago
• wenjiegroup / PEDLA
  PEDLA: predicting enhancers with deep learning-based algorithmic framework
  ☆16Updated 9 years ago
• broadinstitute / dsde-deep-learning
  DSDE Deep Learning Club
  ☆40Updated 6 years ago
• gagneurlab / concise
  Concise: Keras extension for regulatory genomics
  ☆35Updated 2 years ago
• xypan1232 / iDeep
  iDeep: integrated prediction of RNA-protein binding sites using deep learning
  ☆39Updated 4 years ago
• jssong-lab / maxEnt
  ☆11Updated 7 years ago
• kundajelab / genomelake
  Simple and efficient access to genomic data for deep learning models.
  ☆43Updated 5 years ago
• yuanyc06 / deepgene
  Source code of the paper "DeepGene: an advanced cancer type classifier based on deep learning and somatic point mutations"
  ☆13Updated 7 years ago
• ddofer / asap
  Amino-Acid Sequence Annotation Predictor (ASAP)
  ☆25Updated 5 years ago
• david-r-cox / Gene2vec
  Vector space representation of genetic data
  ☆36Updated 8 years ago
• ueser / FIDDLE
  Flexible Integration of Data with Deep LEarning
  ☆50Updated 2 years ago
• kundajelab / dfim
  Deep Feature Interaction Maps (DFIM)
  ☆53Updated 6 years ago
• gmcvicker / genome
  Python library and scripts for retrieval and storage of genomics data in HDF5 format
  ☆26Updated 6 years ago
• greenelab / DAPS
  Denoising Autoencoders for Phenotype Stratification
  ☆41Updated 6 years ago
• llSourcell / DeepMind-alphafold-repl
  https://moalquraishi.wordpress.com/2018/12/09/alphafold-casp13-what-just-happened/
  ☆50Updated 6 years ago
• jaak-s / macau
  Bayesian Factorization with Side Information in C++ with Python wrapper
  ☆41Updated 3 years ago
• gwh120104 / deepmetabolism
  DeepMetabolism is a deep learning algorithm to predict phenotype from genome sequencing
  ☆31Updated 8 years ago
• dreamtools / dreamtools
  Code sharing related to DREAM challenges
  ☆23Updated 8 years ago
• kundajelab / keras
  Theano-based Deep Learning library (convnets, recurrent neural networks, and more).
  ☆14Updated 7 years ago
• uci-cbcl / FactorNet
  A deep learning package for predicting TF binding
  ☆42Updated 5 years ago
• kundajelab / seqdataloader
  Sequence data label generation and ingestion into deep learning models
  ☆12Updated 3 years ago