This repository contains the code, and access to the pretrained models and datasets for the paper: "Automated analysis of high-content microscopy data with deep learning"
☆50Apr 30, 2017Updated 9 years ago
Alternatives and similar repositories for DeepLoc
Users that are interested in DeepLoc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Using Machine Learning to Identify Glioblastoma patients with NF1 inactivation☆11Dec 19, 2016Updated 9 years ago
- A fast and cross-platform image analysis framework for fluorescence time-lapse microscopy and bioimage informatics.☆45Jun 18, 2024Updated 2 years ago
- Galaxy Docker repository with Imaging tools (Galaxy Imaging flavour)☆12Jan 11, 2026Updated 7 months ago
- Deep Learning package for Python☆25Apr 5, 2018Updated 8 years ago
- A curated list of awesome deep learning applications in the field of computational biology☆11Aug 3, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Curated metadata for all studies published in the Image Data Resource☆17May 19, 2026Updated 3 months ago
- Repository for the code for DeepATAC project presented at WCB workshop in ICML2017☆22Aug 9, 2017Updated 9 years ago
- Machine learning workflows for analyzing high-throughput protein data☆27Nov 22, 2016Updated 9 years ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Dec 7, 2021Updated 4 years ago
- A python module for the clustergrammer matrix visualization project that creates the JSON object for the front-end JavaScript portion of …☆12May 5, 2021Updated 5 years ago
- Message Passing Neural Networks for Molecule Property Prediction☆12Jan 17, 2020Updated 6 years ago
- U-net based segmentation of nuclei in microscopy images☆56Sep 13, 2018Updated 7 years ago
- Representation Learning for detection of phenotype-associated cell subsets☆70Oct 24, 2020Updated 5 years ago
- ☆60Jul 5, 2017Updated 9 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- mcib3d core library for 3D ImageJ suite☆16Oct 6, 2022Updated 3 years ago
- Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.☆44Jul 25, 2018Updated 8 years ago
- ☆17Aug 24, 2026Updated last week
- Self-Supervised Vision Transformers for multiplexed imaging datasets☆68Apr 23, 2026Updated 4 months ago
- Python3 teaching materials for functions and modules (1 day)☆16Jul 11, 2018Updated 8 years ago
- MSRSegNet: Multi-Scale Residual Network for Semantic Segmentation☆10Aug 9, 2018Updated 8 years ago
- A simulation framework to analyze signal flows in complex networks☆15Jun 11, 2026Updated 2 months ago
- Implementation of iMolCLR: "Improving Molecular Contrastive Learning via Faulty Negative Mitigation and Decomposed Fragment Contrast" in …☆20Aug 30, 2022Updated 4 years ago
- A web application for classifying objects☆29Nov 23, 2021Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- DSDE Deep Learning Club☆40Mar 28, 2019Updated 7 years ago
- Deep Learning Library for R☆12May 6, 2018Updated 8 years ago
- Demos for Cell Proposal Networks presented in ICIP 16 and DLMIA 16 (MICCAI-W)☆17May 9, 2017Updated 9 years ago
- Jupyter notebooks from our OMERO Plus for High Content Screening & Analysis webinar☆13Oct 30, 2023Updated 2 years ago
- NMF-mGPU web site:☆27May 2, 2015Updated 11 years ago
- ☆20Mar 31, 2021Updated 5 years ago
- Annotate sequences from BLAST against KEGG DB with KO numbers and summarize them in KEGG modules.☆23Dec 27, 2018Updated 7 years ago
- A deep learning package for predicting TF binding☆43Jan 23, 2020Updated 6 years ago
- Protein order and disorder data for Keras, Tensor Flow and Edward frameworks with automated update cycle made for continuous learning app…☆169Jun 15, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆51Jun 26, 2018Updated 8 years ago
- This package can be used to read image data using BioFormats into numpy arrays. It was initially created to read CZI image files, but sho…☆12May 21, 2021Updated 5 years ago
- Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"☆11Oct 27, 2020Updated 5 years ago
- Public repository for building and analyzing protein complex maps☆12Dec 6, 2016Updated 9 years ago
- Algorithm for round cells identification in the brightfield microscopy images.☆22Aug 19, 2023Updated 3 years ago
- Fast and versatile biomolecular structure PDB file parser using SQL queries☆24Mar 17, 2023Updated 3 years ago
- fragbuilder is a tool to create, setup and analyze QM calculations on peptides.☆15Oct 31, 2014Updated 11 years ago