broadinstitute / dsde-deep-learningLinks
DSDE Deep Learning Club
☆40Updated 6 years ago
Alternatives and similar repositories for dsde-deep-learning
Users that are interested in dsde-deep-learning are comparing it to the libraries listed below
Sorting:
- Concise: Keras extension for regulatory genomics☆35Updated 2 years ago
- Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.☆21Updated 7 years ago
- Deep Feature Interaction Maps (DFIM)☆53Updated 6 years ago
- Flexible Integration of Data with Deep LEarning☆51Updated 2 years ago
- Model zoo for genomics☆172Updated last year
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- Python library and scripts for retrieval and storage of genomics data in HDF5 format☆27Updated 6 years ago
- Bioinformatics16: DeepChrome: Deep-learning for predicting gene expression from histone modifications☆63Updated 4 years ago
- Data and code related to the paper "ADAGE-Based Integration of Publicly Available Pseudomonas aeruginosa..." Jie Tan, et al · mSystems · …☆61Updated 9 years ago
- A deep learning package for predicting TF binding☆42Updated 5 years ago
- Deep learning for identifying cis-regulatory elements and other applications☆34Updated 9 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆46Updated 9 years ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- Library for manipulating genomic variants and predicting their effects☆85Updated last year
- Understanding sequence conservation with deep learning☆20Updated 8 years ago
- pysster: Learning Sequence And Structure Motifs In Biological Sequences Using Convolutional Neural Networks☆86Updated 6 years ago
- Efficient handling of FASTQ files from Python☆51Updated last week
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆33Updated 8 years ago
- SevenBridges Python Api bindings☆46Updated 9 months ago
- This repository holds the companion project to Goby3, used to train and evaluate deep learning models to call variations. This repository…☆51Updated 7 years ago
- An Open Platform for Harmonisation & Analysis of Sequencing & Phenotype Data☆33Updated 3 years ago
- Python module for the easy handling and analysis of DNase-seq data☆37Updated 6 years ago
- Kipoi's model zoo API☆239Updated last year
- Ranked vaccine peptides for personalized cancer immunotherapy☆59Updated last year
- Perform hyper-parameter tuning, training, testing and prediction with Keras☆44Updated 7 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆50Updated 2 years ago
- Deep neural networks for predicting CpG methylation☆151Updated 6 years ago
- Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines☆88Updated 2 months ago
- NeuSomatic: Deep convolutional neural networks for accurate somatic mutation detection☆173Updated 3 years ago
- Downloader for ENCODE☆32Updated 5 years ago