flag0010 / pop_gen_cnnLinks
☆80Updated last year
Alternatives and similar repositories for pop_gen_cnn
Users that are interested in pop_gen_cnn are comparing it to the libraries listed below
Sorting:
- CNN based classifier for detecting viral sequences among metagenomic contigs☆33Updated 4 years ago
- Simple and efficient access to genomic data for deep learning models.☆43Updated 5 years ago
- SplitThreader has moved into Ribbon!☆67Updated 10 months ago
- Python version of Factored Spectrally Transformed Linear Mixed Models☆52Updated last month
- genotype dimensionality reduction with a VAE☆46Updated 4 months ago
- Bioinformatics Open Source Sequence machine☆33Updated last year
- Global phylogenies of SARS-CoV-2 sequences☆86Updated last year
- Arioc: GPU-accelerated DNA short-read alignment☆70Updated last month
- Fishers Exact Test for Python (Cython)☆66Updated 3 months ago
- An Artificial Neural Network-based discriminator for validating clinically significant genomic variants☆35Updated last year
- A simple neural network for calling het-/hom-variants from alignments of single molecule reads to a reference☆58Updated 7 years ago
- Efficient handling of FASTQ files from Python☆51Updated last month
- A repository for the GenGraph toolkit for the creation and manipulation of graph genomes☆51Updated 3 years ago
- Identity-by-descent inference using the templated positional Burrows-Wheeler transform (TPBWT)☆43Updated last year
- A Strategy for Building and Using a Human Reference Pangenome☆70Updated 5 years ago
- An extensible python-based genomics visualization engine☆145Updated last year
- Genetics training camp☆21Updated 4 years ago
- fast, memory-efficient, pythonic (and command-line) access to fasta sequence files☆87Updated 7 years ago
- Course materials for the IBioIC Introduction to Bioinformatics training course☆12Updated 8 years ago
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Updated 6 years ago
- This repository holds the companion project to Goby3, used to train and evaluate deep learning models to call variations. This repository…☆52Updated 7 years ago
- Code for the CRISPOR article, all data and code to create figures and analysis☆40Updated 8 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆75Updated 3 weeks ago
- A Python interface to the Ensembl REST APIs, biological data at your fingertips.☆12Updated last year
- Python library to simulate evolutionary sequence data☆80Updated 3 years ago
- simuG: a general-purpose genome simulator☆96Updated 3 weeks ago
- small RNA analysis from NGS data☆37Updated 10 months ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆92Updated 4 years ago
- Simple vcf parser, based on PyVCF☆46Updated 6 years ago
- Tools and utilities for running Dockerized metagenomics tools in the Cloud☆22Updated 6 years ago