Alternatives and similar repositories for corals-lib-python

Users that are interested in corals-lib-python are comparing it to the libraries listed below

• netZoo / netbooks
  Netbooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo methods..
  ☆45Updated 2 months ago
• GPZ-Bioinfo / tmap
  topological data analysis of population-scale microbiomes
  ☆31Updated 2 years ago
• Metaboverse / Metaboverse
  Visualization and analysis platform for metabolic data and network pattern recognition
  ☆40Updated 9 months ago
• saezlab / networkcommons
  NetworkCommons is a community-driven platform designed to simplify access to tools and resources for inferring context-specific protein i…
  ☆29Updated 5 months ago
• krassowski / gsea-api
  Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)
  ☆16Updated 2 years ago
• AlexsLemonade / OpenPBTA-manuscript
  The manuscript repository for the Open Pediatric Brain Tumor Atlas Project
  ☆14Updated 2 years ago
• pachterlab / gget_examples
  Examples for gget (https://github.com/pachterlab/gget).
  ☆39Updated 4 months ago
• stracquadaniolab / pygna
  A Python package for gene network analysis
  ☆32Updated 3 years ago
• bio2bel / kegg
  A Bio2BEL package for integrating pathway-related information from KEGG in BEL
  ☆13Updated 3 years ago
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆29Updated 7 months ago
• JonnyTran / OpenOmics
  A bioinformatics API to interface with public multi-omics bio databases for wicked fast data integration.
  ☆36Updated last year
• SBRG / precise-db
  A high-fidelity E. coli RNA-seq compendium
  ☆33Updated 4 years ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆28Updated 11 months ago
• aristoteleo / dynast-release
  Inclusive and efficient quantification of labeling and splicing RNAs for time-resolved metabolic labeling based scRNA-seq experiments
  ☆19Updated 5 months ago
• goodarzilab / SwitchFinder
  ☆19Updated last year
• amirmohan / SPROUT
  SPROUT is a machine learning tool to predict the DNA repair outcome in CRISPR experiments.
  ☆15Updated 4 years ago
• jolespin / soothsayer
  High-level analysis package for (bio-)informatics
  ☆11Updated last year
• JanZrimec / DeepExpression
  ☆33Updated 3 years ago
• p-koo / evoaug
  Evolution-inspired data augmentations for PyTorch-based models for regulatory genomics
  ☆25Updated 7 months ago
• kuijjerlab / retriever
  Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data
  ☆16Updated 3 years ago
• suinleelab / PAUSE
  Code for paper "Principled feature attribution for unsupervised gene expression analysis"
  ☆12Updated 2 years ago
• broadinstitute / adapt
  A package for designing activity-informed nucleic acid diagnostics for viruses.
  ☆35Updated 2 years ago
• ericminikel / genetic_support
  Refining the impact of genetic evidence on clinical success
  ☆27Updated last year
• ML4GLand / SeqPro
  Genomic sequence preprocessing toolkit
  ☆13Updated this week
• bendemeo / hopper
  Diverse sampling for single-cell datasets
  ☆16Updated 5 years ago
• jmschrei / ledidi
  Ledidi turns any machine learning model into a biological sequence editor, allowing you to design sequences with desired properties.
  ☆98Updated 7 months ago
• mircare / Brewery
  State-of-the-art ab initio prediction of 1D protein structure annotations
  ☆14Updated 4 years ago
• ArcInstitute / ScreenPro2
  Flexible analysis of high-content CRISPR screening
  ☆30Updated 4 months ago
• wilkelab / ProteinEvolutionToolbox
  ☆15Updated 9 years ago
• CCSB-DFCI / HuRI_paper
  Code for the analyses in the human reference interactome paper.
  ☆28Updated 3 years ago