Metaboverse / MetaboverseLinks
Visualization and analysis platform for metabolic data and network pattern recognition
☆40Updated 9 months ago
Alternatives and similar repositories for Metaboverse
Users that are interested in Metaboverse are comparing it to the libraries listed below
Sorting:
- Examples for gget (https://github.com/pachterlab/gget).☆39Updated 3 months ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated 3 weeks ago
- Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for …☆57Updated 7 months ago
- A collection of useful functions for bioinformatics data analysis☆24Updated 3 weeks ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆42Updated 3 weeks ago
- DEqMS is a tool for quantitative proteomic analysis☆24Updated 8 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 3 years ago
- ☆38Updated 2 years ago
- This is the public repository for the EPIC tool.☆18Updated 3 years ago
- A project for exploring differentially active signaling paths related to proteomics datasets☆44Updated 5 months ago
- R package for analysing proteomics data☆50Updated 2 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆62Updated 5 years ago
- Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…☆37Updated 3 weeks ago
- DRUGZ software☆25Updated 4 years ago
- bioinformatics plotting and tools☆59Updated last year
- immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.☆73Updated this week
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 4 years ago
- ☆19Updated last year
- Shiny app for making and annotating Volcano plots☆25Updated 3 weeks ago
- Knowledge-primed neural networks☆38Updated 2 years ago
- Stitchr - a Python script to stitch together coding TCR nucleotide sequences from V, J, and CDR3 info☆64Updated 4 months ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆66Updated 4 years ago
- Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.☆84Updated 4 years ago
- ☆36Updated 10 months ago
- A shiny-based web tool for interactive analysis of DepMap data☆24Updated 4 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆16Updated 3 years ago
- ☆31Updated 6 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆30Updated last year
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago