mbhall88 / rasusaView external linksLinks
Randomly subsample sequencing reads or alignments
☆254Updated this week
Alternatives and similar repositories for rasusa
Users that are interested in rasusa are comparing it to the libraries listed below
Sorting:
- Create a tree using Mash distances☆182Oct 24, 2023Updated 2 years ago
- Fasten toolkit, for streaming operations on fastq files☆81Oct 24, 2025Updated 3 months ago
- Genome size estimation from long read overlaps☆80Dec 1, 2025Updated 2 months ago
- Assemble bacterial isolate genomes from Nanopore reads☆127Jan 22, 2025Updated last year
- Split k-mer analysis – version 2☆104Jan 29, 2026Updated 2 weeks ago
- Bifrost graph gene caller.☆98Jan 20, 2026Updated 3 weeks ago
- bioinformatics toolkit in rust☆93Sep 28, 2025Updated 4 months ago
- a short-read polishing tool for long-read assemblies☆206Sep 19, 2025Updated 4 months ago
- Generate random test data for bioinformatics☆27Jun 17, 2024Updated last year
- Strain-level haplotyping for metagenomes with short or long-reads.☆63Apr 10, 2025Updated 10 months ago
- ☆232Feb 3, 2026Updated last week
- Minimal but speedy quality control for nanopore reads in Rust☆137Sep 16, 2024Updated last year
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆209Updated this week
- A genome completeness evaluation tool based on miniprot☆233Sep 18, 2025Updated 4 months ago
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆235Oct 12, 2025Updated 4 months ago
- Align proteins to genomes with splicing and frameshift☆395Jan 5, 2026Updated last month
- Remove human reads from a sequencing run☆47Dec 16, 2025Updated 2 months ago
- De novo genome assembler for long uncorrected reads☆229Nov 15, 2023Updated 2 years ago
- Hybrid error correction of long reads using colored de Bruijn graphs