HarveyYan / RNATrackerLinks
Prediction of mRNA subcellular localization using deep recurrent neural networks
☆15Updated 5 years ago
Alternatives and similar repositories for RNATracker
Users that are interested in RNATracker are comparing it to the libraries listed below
Sorting:
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 4 years ago
- ☆14Updated 8 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆12Updated 4 years ago
- A VGAE-based model to infer transcription factor regulatory network☆27Updated 2 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆50Updated 3 years ago
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆19Updated last year
- ☆33Updated 2 years ago
- ☆38Updated 2 years ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆26Updated 2 years ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 2 years ago
- scPretrain: Multi-task self-supervised learning for cell type classification☆23Updated 3 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆42Updated last year
- ☆48Updated 6 years ago
- resVAE is a restricted latent variational autoencoder that we wrote to uncover hidden structures in gene expression data, especially usin…☆12Updated 2 years ago
- ☆29Updated 2 years ago
- ☆17Updated 3 years ago
- ☆82Updated 2 years ago
- ☆16Updated 3 years ago
- GEDFN: Graph-Embedded Deep Feedforward Network☆23Updated 6 years ago
- Deep Learning Method to Identify Cancer Associated TCRs☆47Updated 2 years ago
- Code to reproduce results in Ravindra NG* & Sehanobish A* et al. 2020, "Disease State Prediction From Single-Cell Data Using Graph Attent…☆16Updated 5 years ago
- DeepTACT: predicting three-dimensional chromatin contacts via bootstrapping deep learning☆20Updated 4 years ago
- repository containing analysis scripts and auxiliary files☆34Updated 5 years ago
- Generative adversarial networks for single-cell RNA-seq imputation☆39Updated 4 years ago
- covolutional neural network based coexpression analysis☆78Updated 5 years ago
- ☆10Updated 4 years ago
- multiway chromatin interaction, 3D genome, single-nucleus, hypergraph representation learning☆29Updated 2 years ago
- Single Cell Consensus Clustering with Speed☆21Updated 2 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆73Updated 4 months ago
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Updated 6 years ago