Prediction of mRNA subcellular localization using deep recurrent neural networks
☆15Jul 19, 2019Updated 6 years ago
Alternatives and similar repositories for RNATracker
Users that are interested in RNATracker are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆11Oct 31, 2023Updated 2 years ago
- Predicting protein subcellular localization using deep learning☆16Sep 13, 2019Updated 6 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆13Apr 21, 2021Updated 5 years ago
- An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis☆23Oct 15, 2024Updated last year
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆10Aug 4, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- Model-based analysis of APA using 3' end-linked reads☆12Aug 14, 2021Updated 4 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 7 years ago
- ☆13Jul 5, 2019Updated 6 years ago
- Inferring disease-associated miRNAs☆10Mar 21, 2020Updated 6 years ago
- APAlyzer is a toolkit for bioinformatic analysis of alternative polyadenylation (APA) events using RNA sequencing data. Our main approach…☆13Apr 5, 2026Updated 2 months ago
- mRNN is an implementation of a Gated Recurrent Unit (GRU) network for classification of transcripts as either coding or noncoding.☆22Dec 6, 2018Updated 7 years ago
- A collection of bioinformatics data analysis notebooks focused on providing examples of current best practices in sequencing data analysi…☆17Apr 27, 2026Updated last month
- Single-cell biological network inference using a heterogeneous graph transformer☆77Feb 24, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data☆16Mar 15, 2023Updated 3 years ago
- ☆16Mar 3, 2023Updated 3 years ago
- ☆10Mar 19, 2020Updated 6 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Jun 4, 2018Updated 8 years ago
- polyApipe☆21Feb 10, 2025Updated last year
- CoGO: a contrastive learning framework to predict disease similarity based on gene network and ontology structure☆16Sep 30, 2024Updated last year
- Bullseye analysis pipeline for DART-seq analysis☆15May 25, 2026Updated 2 weeks ago
- A deep learning framework for predicting lncRNA–disease associations☆10Dec 29, 2020Updated 5 years ago
- SODAR: System for Omics Data Access and Retrieval☆21Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reproducing the experiments in the paper☆11Dec 14, 2021Updated 4 years ago
- Integrative orthogonal non-negative matrix factorization☆31Sep 29, 2019Updated 6 years ago
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆16Apr 13, 2021Updated 5 years ago
- snakemake-based workflows☆12Jul 20, 2022Updated 3 years ago
- Decomposition-based peak identification, which find peaks across a large number of TSS (transcription starting site) profiles☆15Aug 3, 2017Updated 8 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆36Dec 5, 2020Updated 5 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆15Nov 5, 2018Updated 7 years ago
- ☆15Feb 28, 2022Updated 4 years ago
- ☆11Feb 18, 2019Updated 7 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- MIT开发的支持整数向量的同态加密 支持向量的加法，乘法和内积☆15Jun 12, 2020Updated 6 years ago
- ☆21Mar 20, 2017Updated 9 years ago
- ☆18Jul 3, 2022Updated 3 years ago
- The analysis pipeline for FLEP-seq☆17Aug 18, 2023Updated 2 years ago
- Vector representations of gene co-expression in single cell RNAseq.☆37Jun 7, 2026Updated last week
- single cell RNA-seq analysis template based on online resources☆11Jul 1, 2018Updated 7 years ago
- Spatial transcriptomics analyses and decoding in R☆25Oct 23, 2025Updated 7 months ago