Alternatives and similar repositories for genekitr

Users that are interested in genekitr are comparing it to the libraries listed below

• NBISweden / workshop-epigenomics-RTDs
  workshop website on readthedocs
  ☆19Updated last month
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated last year
• kerseviciute / aPEAR
  Enrichment Networks for Pathway Enrichment Analysis
  ☆52Updated 2 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆50Updated 7 months ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 5 years ago
• YosefLab / ImpulseDE2
  ☆38Updated 2 years ago
• YuLab-SMU / ggsc
  🧠 Visualizing Single Cell and Spatial Transcriptomics
  ☆47Updated last month
• bjmt / universalmotif
  Motif manipulation functions for R.
  ☆28Updated last month
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆30Updated last year
• Core-Bioinformatics / bulkAnalyseR
  ☆28Updated last year
• saezlab / transcriptutorial
  This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
  ☆55Updated 2 years ago
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated 2 weeks ago
• NBISweden / workshop-RNAseq
  Workshop • Analysis of RNA-seq data
  ☆36Updated last year
• Novartis / easyTrackHubs
  This package provides a function to reformat lists of genome coverage files, such as bigWig of bam files, into the directory structure of…
  ☆28Updated last year
• mhalushka / miRge3.0
  Comprehensive analysis of small RNA sequencing data
  ☆31Updated 3 weeks ago
• waldronlab / HGNChelper
  Identify and correct invalid gene symbols
  ☆58Updated 6 months ago
• noriakis / CBNplot
  Bayesian network plot for the enrichment analysis results
  ☆64Updated 8 months ago
• jokergoo / KeywordsEnrichment
  ☆32Updated last year
• hukai916 / scATACpipe
  ☆27Updated 7 months ago
• benben-miao / TOmicsVis
  Transcriptomics Visualization R package.
  ☆72Updated last month
• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆25Updated last year
• jianhong / trackViewer
  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
  ☆70Updated last month
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆36Updated 6 years ago
• pachterlab / kallisto-transcriptome-indices
  Reference transcriptome indices build from kallisto for popular organisms
  ☆42Updated last year
• mdozmorov / RNA-seq_notes
  A continually expanding collection of RNA-seq tools
  ☆50Updated 7 months ago
• almeidasilvaf / BioNERO
  Easy and comprehensive biological network reconstruction and analysis
  ☆29Updated 8 months ago
• BaderLab / Cytoscape_workflows
  collection of notebooks with different cytoscape workflows
  ☆49Updated 2 years ago
• fmicompbio / monaLisa
  binned motif enrichment analysis and visualisation
  ☆40Updated last month
• NKI-GCF / XenofilteR
  Filtering of PDX samples for mouse derived reads
  ☆28Updated 2 years ago
• PhanstielLab / bedtoolsr
  R package wrapping bedtools
  ☆41Updated 2 months ago