Deep learning model to predict degron sequences
☆19Feb 24, 2023Updated 3 years ago
Alternatives and similar repositories for deepDegron
Users that are interested in deepDegron are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.☆30Jun 3, 2022Updated 3 years ago
- ☆27May 29, 2023Updated 2 years ago
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆36May 30, 2021Updated 4 years ago
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆24May 19, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Error correction of ONT transcript reads☆58Sep 6, 2023Updated 2 years ago
- Nextflow pipeline to re-process all public single-cell RNA-seq data☆33Jul 9, 2025Updated 9 months ago
- Amino Acid Embedding Representation as Machine Learning Features☆21Aug 3, 2018Updated 7 years ago
- A python package for chromVAR☆33May 1, 2023Updated 3 years ago
- "Representation Learning of Genomic Sequence Motifs with Convolutional Neural Networks" by Peter K. Koo and Sean R. Eddy☆34Jan 7, 2020Updated 6 years ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆67Apr 2, 2025Updated last year
- Library and tool for annotating MAF files using Genome Nexus Webserver API☆12Feb 25, 2026Updated 2 months ago
- ☆23Jan 6, 2026Updated 3 months ago
- 🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…☆11Oct 16, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ABC of chemoinformatics☆20Aug 3, 2018Updated 7 years ago
- String algorithm visualizations☆13Feb 7, 2023Updated 3 years ago
- interactive Multi Objective K-mer Analysis☆24Mar 5, 2023Updated 3 years ago
- Robust individual and aggregate checksums for nucleotide sequences☆17Mar 3, 2026Updated 2 months ago
- In this study, we perform systematic comparative analysis of seven widely-used SNV-calling methods, including SAMtools, the GATK Best Pra…☆16Oct 16, 2019Updated 6 years ago
- ☆19Mar 21, 2024Updated 2 years ago
- ☆21Jun 17, 2024Updated last year
- Computational Biology- Spring 2021☆49Nov 1, 2021Updated 4 years ago
- dalmatian is a collection of high-level companion functions for Firecloud and FISS.☆19Mar 31, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Apr 24, 2026Updated last week
- Interactive visual analytic tool for exploring epigenomics data w/ associated metadata, powered by HiGlass and Gosling☆13Nov 10, 2023Updated 2 years ago
- get full paper names for downloaded publications automatically☆22Feb 23, 2023Updated 3 years ago
- Deep learning in genomics☆20Jan 26, 2019Updated 7 years ago
- A probabilistic factor model for spatial transcriptomics data with subcellular resolution☆25May 3, 2023Updated 3 years ago
- ☆13Updated this week
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆19Nov 18, 2025Updated 5 months ago
- Code for the analysis performed in the paper "Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromati…☆12Oct 16, 2025Updated 6 months ago
- ANS_signature_scoring: A gene expression signature scoring Python package.☆19Jan 18, 2026Updated 3 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆31Mar 30, 2026Updated last month
- Repo with analysis code for the vascular atlas paper☆10Nov 22, 2024Updated last year
- Transcriptional regulatory network inference from gene expression and prior information with LASSO-StARS☆15May 3, 2022Updated 4 years ago
- a protein descriptor for site prediction☆16Aug 9, 2019Updated 6 years ago
- Volume-regularized NMF☆18Apr 14, 2022Updated 4 years ago
- ☆16Jun 22, 2020Updated 5 years ago
- A useful tool for shuffling biological sequences while preserving the k-let counts☆14Apr 23, 2024Updated 2 years ago