pachterlab / BBB
Bioinformatics for Benched Biologists
☆22Updated 4 years ago
Alternatives and similar repositories for BBB:
Users that are interested in BBB are comparing it to the libraries listed below
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 3 years ago
- Transcript quantification import with automatic metadata detection☆67Updated 2 months ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆28Updated 5 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆23Updated 4 years ago
- ☆17Updated 10 months ago
- Differential ATAC-seq toolkit☆27Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 8 months ago
- ☆29Updated 5 months ago
- Statistical power studies for multi-omics experiments.☆31Updated 2 months ago
- Mean Alterations Using Discrete Expression☆14Updated last year
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆21Updated 2 months ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated last year
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Create QC and summary reports for Alevin output☆32Updated 3 months ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Updated 2 years ago
- Explore the cancer relevance of your gene list☆51Updated last month
- BAGEL software☆27Updated last year
- Genomic data interpretation and visualization Workshop☆19Updated last year
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆27Updated 3 years ago
- Isoform-level functional RNA-Seq analysis 🧬☆22Updated 4 months ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 6 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆49Updated 5 years ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- ☆12Updated 10 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- ☆19Updated 4 months ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆24Updated last year