marbl / PrimatesLinks
Complete assemblies of non-human primate genomes
☆51Updated 4 months ago
Alternatives and similar repositories for Primates
Users that are interested in Primates are comparing it to the libraries listed below
Sorting:
- perSVade: personalized Structural Variation detection☆40Updated last month
- ☆20Updated 3 years ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆57Updated last month
- Computational Analysis of Gene Expression Evolution☆43Updated last month
- A Nextflow workflow to generate lift over files for any pair of genomes☆68Updated 3 months ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- read and analyse RepeatMasker output☆25Updated 2 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆76Updated 3 weeks ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 7 months ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆36Updated 2 months ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 10 months ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- Materials for Spring 2021 Applied Genomics Course☆53Updated 4 years ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆45Updated last month
- A Nextflow pipeline for evaluating assembly quality☆37Updated 2 weeks ago
- Compute N50/NG50 and auN/auNG☆32Updated 2 years ago
- orthology assignment using phylogenetic and network analyses☆47Updated 7 months ago
- ☆36Updated 2 months ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆40Updated 2 weeks ago
- ☆28Updated 2 years ago
- hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.☆69Updated last week
- In-depth characterization and annotation of differences between two sets of DNA sequences☆62Updated 5 years ago
- Segmental Duplication Assembler (SDA).☆44Updated 2 years ago
- A battery of methylation tools for PacBio HiFi reads☆42Updated last month
- MCHelper: An automatic tool to curate transposable element libraries☆42Updated 3 months ago
- Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads☆21Updated 3 years ago
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆58Updated last year
- Linear-time de novo Long Read Assembler☆41Updated 8 months ago
- ☆66Updated last month