marbl / PrimatesLinks
Complete assemblies of non-human primate genomes
☆50Updated last month
Alternatives and similar repositories for Primates
Users that are interested in Primates are comparing it to the libraries listed below
Sorting:
- perSVade: personalized Structural Variation detection☆39Updated 4 months ago
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆35Updated last week
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆43Updated 2 weeks ago
- Tiberius is a deep learning gene finder.☆65Updated this week
- A local-haplotagging-based small and structural variant caller☆78Updated last month
- Materials for Spring 2021 Applied Genomics Course☆53Updated 4 years ago
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆31Updated 4 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆57Updated 2 years ago
- Compute N50/NG50 and auN/auNG☆32Updated last year
- Integrate multiple genome assemblies into a pangenome graph☆34Updated 3 years ago
- A Nextflow pipeline for evaluating assembly quality☆34Updated this week
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆38Updated 2 months ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆56Updated 5 months ago
- A program for assessing the T2T genome continuity☆79Updated last week
- ☆41Updated 4 months ago
- ☆32Updated 11 months ago
- ☆63Updated 2 weeks ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆68Updated 2 weeks ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆49Updated 3 months ago
- Snakemake pipeline to analyze transposable element 'omics data.☆24Updated this week
- Computational Analysis of Gene Expression Evolution☆42Updated 2 weeks ago
- ☆20Updated 3 years ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆32Updated 3 months ago
- Improved Inference of Ortholog Groups using Hidden Markov Models☆35Updated 3 months ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆43Updated 2 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆43Updated 8 months ago
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆29Updated 9 months ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆46Updated 4 years ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆32Updated 2 months ago