marbl / PrimatesLinks
Complete assemblies of non-human primate genomes
☆53Updated 6 months ago
Alternatives and similar repositories for Primates
Users that are interested in Primates are comparing it to the libraries listed below
Sorting:
- perSVade: personalized Structural Variation detection☆40Updated 2 months ago
- Method for inferring path posterior probabilities and abundances from pangenome graph read alignments☆58Updated 2 months ago
- Computational Analysis of Gene Expression Evolution☆43Updated 3 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated this week
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 10 months ago
- A high performance tool to identify orthologs and paralogs across genomes.☆27Updated 2 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 8 months ago
- ☆20Updated 3 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆53Updated 11 months ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Updated last year
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆36Updated last week
- Materials for Spring 2021 Applied Genomics Course☆53Updated 4 years ago
- A battery of methylation tools for PacBio HiFi reads☆43Updated last week
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- Linear-time de novo Long Read Assembler☆41Updated last month
- ☆29Updated 2 years ago
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆34Updated 3 months ago
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆81Updated this week
- A Python package for testing evolutionary hypotheses in genome-wide approaches.☆32Updated 4 years ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- Dot: An interactive dot plot viewer for comparative genomics☆34Updated 2 years ago
- A program for assessing the T2T genome continuity☆89Updated last month
- a broadly applicable tool for automated gene identification and retrieval☆32Updated 11 months ago
- A Nextflow pipeline for evaluating assembly quality☆38Updated 2 weeks ago
- ☆47Updated 3 weeks ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆46Updated 2 months ago
- Scoring GT/AG sites for improving spliced alignment☆46Updated 2 weeks ago
- ☆36Updated 3 months ago
- Integrate multiple genome assemblies into a pangenome graph☆35Updated 3 years ago