A faster and angrier package for EBMF.
☆15Dec 10, 2025Updated 2 months ago
Alternatives and similar repositories for flashier
Users that are interested in flashier are comparing it to the libraries listed below
Sorting:
- R package for fast maximum-likelihood estimation of mixture proportions using SQP.☆11Dec 21, 2023Updated 2 years ago
- Scalable Ultra-Sparse Bayesian PCA☆32Feb 13, 2024Updated 2 years ago
- R package for Empirical Bayes Factor Analysis.☆52Dec 4, 2024Updated last year
- Fast algorithms for fitting topic models and non-negative matrix factorizations to count data.☆86Feb 16, 2026Updated 2 weeks ago
- R package for adaptive correlation and covariance matrix shrinkage.☆23Jan 23, 2019Updated 7 years ago
- Effective Computing—Resources for Computational Biologists☆27Apr 17, 2020Updated 5 years ago
- Multivariate adaptive shrinkage methods used for analysis GTEx data in Urbut et al (2017).☆12Sep 25, 2017Updated 8 years ago
- Repo for Dynamic Statistical Comparisons project☆13Feb 5, 2024Updated 2 years ago
- Tissue of ACTion scores for Investigating Complex trait-Associated Loci☆13Mar 27, 2021Updated 4 years ago
- Software for linkage disequilibrium graphical models☆16Apr 6, 2025Updated 10 months ago
- Large-scale Bayesian variable selection for R and MATLAB.☆41Mar 22, 2023Updated 2 years ago
- Learning meaningful representations of genes☆21Jul 7, 2025Updated 7 months ago
- Code and analyses from "FDR: A New Deal" paper☆15Apr 18, 2017Updated 8 years ago
- ☆19Feb 17, 2021Updated 5 years ago
- R package for "sum of single effects" regression.☆245Updated this week
- Learn and validate subtypes from multiple traits☆20Jun 15, 2021Updated 4 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Apr 25, 2023Updated 2 years ago
- An R package for multivariate adaptive shrinkage.☆93Nov 7, 2024Updated last year
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Oct 9, 2020Updated 5 years ago
- Various Ideas for Confounder Adjustment in Regression☆24May 8, 2023Updated 2 years ago
- A new model and algorithm for multivariate Bayesian variable selection regression.☆26Feb 3, 2026Updated last month
- Single-cell Hierarchical Poisson Factorization☆75Feb 14, 2026Updated 2 weeks ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated last year
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Dec 12, 2018Updated 7 years ago
- LASSO for GWAS with summary statistics☆79Sep 24, 2020Updated 5 years ago
- Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)☆34Oct 6, 2022Updated 3 years ago
- Exact Hamiltonian Monte Carlo Sampler for Truncated Multivariate Gaussians☆12Feb 11, 2020Updated 6 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆33Jan 15, 2021Updated 5 years ago
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- ☆10Jun 13, 2018Updated 7 years ago
- Density estimation using Gaussian mixtures in the presence of noisy, heterogeneous and incomplete data☆82Nov 24, 2025Updated 3 months ago
- A package for reading ABF (binary format used by Axon pCLAMP)☆10Jul 21, 2020Updated 5 years ago
- ImageJ macro for microglia morphology analysis☆17Jan 13, 2026Updated last month
- Simulate GWAS data from an arbitrary DAG☆11Oct 29, 2025Updated 4 months ago
- A fine-mapping method integrating GWAS summary statistics and functional annotation data☆11Dec 28, 2023Updated 2 years ago
- Implementation of LTFH++☆11Nov 17, 2025Updated 3 months ago
- OSS2017 - Open Science for Synthesis: Gulf Research Program☆10May 12, 2019Updated 6 years ago
- False discovery rate regression☆10Nov 12, 2020Updated 5 years ago
- ☆10Dec 17, 2025Updated 2 months ago