ekirving / qpbruteLinks
Heuristic search algorithm for fitting qpGraph models
☆11Updated 3 years ago
Alternatives and similar repositories for qpbrute
Users that are interested in qpbrute are comparing it to the libraries listed below
Sorting:
- Quantifying Introgression via Branch Lengths☆55Updated 3 years ago
- Tutorial about R package PopGenome☆43Updated 6 years ago
- SambaR: Snp datA Management and Basic Analyses in R☆32Updated 2 months ago
- Methods for examining PCA locally along the genome.☆86Updated last year
- An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…☆67Updated last year
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆40Updated last year
- Graph-aware Retrieval of Selective Sweeps☆22Updated last year
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆28Updated 7 years ago
- MSMC2 Scripts☆28Updated 3 months ago
- Topology weighting by iterative sampling of sub-trees☆82Updated last year
- Presentations from the course☆38Updated 2 years ago
- Hybridization detection using phylogenetic invariants☆52Updated last year
- Infer demographic history with the Moran model☆50Updated 6 months ago
- DFOIL: Introgression Testing for Five Taxa☆33Updated 4 years ago
- Assessing confidence in introgression among four populations☆28Updated 4 years ago
- ☆42Updated 2 years ago
- R functions for generating site frequency spectra (SFS) from a VCF file.☆28Updated 5 years ago
- Tutorial on using popular tools for learning about population history☆53Updated 7 years ago
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆68Updated 2 months ago
- G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …☆34Updated 4 years ago
- Tutorials on phylogenetic and phylogenomic inference☆49Updated 8 months ago
- Tutorials on evolutionary genomics☆46Updated 3 years ago
- RADseq workflow using STACKS☆61Updated last month
- GONE: Scripts, programs and an example data set☆48Updated 5 months ago
- ☆24Updated 8 years ago
- biodiversity genomics course by Nicol Rueda, Karin Näsvall, Fernando Seixas and Joana Meier from the Wellcome Sanger Institute☆64Updated last month
- A pipeline that accepts a VCF file to run through Admixture☆63Updated last year
- Whole-genome bioinformatic pipeline for pooled or individual-based NGS data using bash and R☆21Updated 3 years ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆85Updated 4 years ago
- ☆45Updated 9 years ago