Alternatives and similar repositories for qpbrute

Users that are interested in qpbrute are comparing it to the libraries listed below

• petrelharp / local_pca
  Methods for examining PCA locally along the genome.
  ☆83Updated last year
• miriammiyagi / QuIBL
  Quantifying Introgression via Branch Lengths
  ☆54Updated 3 years ago
• FerRacimo / GRoSS
  Graph-aware Retrieval of Selective Sweeps
  ☆22Updated last year
• jessicarick / msmc2_scripts
  MSMC2 Scripts
  ☆27Updated 2 weeks ago
• mennodejong1986 / SambaR
  SambaR: Snp datA Management and Basic Analyses in R
  ☆30Updated last month
• dportik / dadi_pipeline
  An accessible and flexible tool for fitting demographic models with dadi using custom or published models (available here), conducting go…
  ☆66Updated last year
• speciationgenomics / presentations
  Presentations from the course
  ☆38Updated 2 years ago
• popgenmethods / momi2
  Infer demographic history with the Moran model
  ☆48Updated 3 months ago
• tonig-evo / workshop-popgenome
  Tutorial about R package PopGenome
  ☆43Updated 6 years ago
• simonhmartin / twisst
  Topology weighting by iterative sampling of sub-trees
  ☆81Updated 9 months ago
• mmatschiner / F4
  Assessing confidence in introgression among four populations
  ☆27Updated 4 years ago
• shenglin-liu / vcf2sfs
  R functions for generating site frequency spectra (SFS) from a VCF file.
  ☆28Updated 5 years ago
• ngarud / SelectionHapStats
  SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…
  ☆27Updated 7 years ago
• carolindahms / TreeMix
  Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…
  ☆37Updated last year
• pblischak / HyDe
  Hybridization detection using phylogenetic invariants
  ☆49Updated 11 months ago
• BenjaminPeter / rangeexpansion
  ☆13Updated 8 years ago
• esrud / GONE
  GONE: Scripts, programs and an example data set
  ☆47Updated 2 months ago
• enormandeau / stacks_workflow
  RADseq workflow using STACKS
  ☆59Updated last week
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆63Updated 11 months ago
• millanek / tutorials
  Tutorials on phylogenetic and phylogenomic inference
  ☆49Updated 5 months ago
• joepickrell / pophistory-tutorial
  Tutorial on using popular tools for learning about population history
  ☆51Updated 7 years ago
• esayyari / DiscoVista
  ☆42Updated 2 years ago
• gphocs-dev / G-PhoCS
  G-PhoCS is a software package for inferring ancestral population sizes, population divergence times, and migration rates from individual …
  ☆34Updated 4 years ago
• stevemussmann / admixturePipeline
  A pipeline that accepts a VCF file to run through Admixture
  ☆62Updated 9 months ago
• tsackton / linked-selection
  ☆24Updated 8 years ago
• simonhmartin / tutorials
  Tutorials on evolutionary genomics
  ☆46Updated 3 years ago
• petrikemppainen / LDna
  LDna: an R package to perform linkage disequilibrium network analysis
  ☆31Updated last year
• PhHermann / LDJump
  R Package to Estimate Variable Recombination Rates using Population Genetic Data
  ☆42Updated 5 years ago
• alachins / raisd
  RAiSD: software to detect positive selection based on multiple signatures of a selective sweep and SNP vectors
  ☆36Updated last year
• jbpease / dfoil
  DFOIL: Introgression Testing for Five Taxa
  ☆33Updated 4 years ago