mahmoodlab / MAPSLinks
Machine learning for Analysis of Proteomics in Spatial biology - Nature Communications
☆57Updated last year
Alternatives and similar repositories for MAPS
Users that are interested in MAPS are comparing it to the libraries listed below
Sorting:
- Foundation Model for Multiplex Spatial Proteomic Images☆66Updated last month
- Sub-cellular spatial transcriptomics Cell Segmentation☆66Updated last year
- Accessible and interoperable whole slide image analysis☆99Updated this week
- ☆135Updated 6 months ago
- Integrated pipeline for multiplexed image analysis☆91Updated 3 months ago
- ☆44Updated 3 years ago
- Biologically-informed deep learning for cell segmentation of subcelluar spatial transcriptomics data☆43Updated 11 months ago
- Self-supervised representation learning combining GTEx histology, RNA-seq and WGS☆29Updated 3 months ago
- Her2 Breast Cancer Project☆84Updated 2 years ago
- ☆63Updated 5 months ago
- ☆71Updated last month
- Deep learning on histopathology images.☆125Updated 3 years ago
- MUSE is a deep learning approach characterizing tissue composition through combined analysis of morphologies and transcriptional states f…☆35Updated 3 years ago
- ☆34Updated last week
- Super-resolved spatial transcriptomics by deep data fusion☆74Updated 2 years ago
- SEQUOIA: Digital profiling of cancer transcriptomes with grouped vision attention☆41Updated last month
- ☆51Updated 5 months ago
- ☆55Updated 2 years ago
- ☆12Updated 2 months ago
- An introduction to deepcell and deep learning☆150Updated 8 months ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆77Updated 4 years ago
- ☆14Updated last week
- Multiple-choice microscopy pipeline☆133Updated 4 months ago
- QuST: QuPath Extension for Integrative Whole Slide Image and Spatial Transcriptomics Analysis☆28Updated 3 weeks ago
- comseg☆23Updated 5 months ago
- DeepSpot: Leveraging Spatial Context for Enhanced Spatial Transcriptomics Prediction from H&E Images☆49Updated last month
- A pixel classification based multiplexed image segmentation pipeline☆96Updated last year
- Spatially Resolved Gene Expression Prediction from H&E Histology Images via Bi-modal Contrastive Learning☆79Updated 8 months ago
- TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUma…☆58Updated last month
- Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many othe…☆51Updated last week