mahmoodlab / Patho-BenchLinks
Standardized benchmark for computational pathology foundation models.
☆102Updated 2 months ago
Alternatives and similar repositories for Patho-Bench
Users that are interested in Patho-Bench are comparing it to the libraries listed below
Sorting:
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆141Updated 7 months ago
- Multimodal prototyping for cancer survival prediction - ICML 2024☆94Updated 7 months ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆91Updated 2 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆108Updated 11 months ago
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆148Updated 10 months ago
- List of pathology feature extractors and foundation models☆153Updated 3 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆106Updated 8 months ago
- Solid Tumor Associative Modeling in Pathology☆86Updated last week
- Awesome List of Digital and Computational Pathology Resources☆79Updated 8 months ago
- ☆56Updated 2 years ago
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆36Updated 9 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆81Updated last year
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆41Updated 4 months ago
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆76Updated 6 months ago
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆96Updated 7 months ago
- TCGA Pathology Reports in Machine Readable Text☆52Updated last year
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆155Updated last year
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆60Updated 7 months ago
- Toolkit for large-scale whole-slide image processing.☆377Updated 2 weeks ago
- Multimodal Whole Slide Foundation Model for Pathology☆241Updated 6 months ago
- A generative toolkit to translate H&E images to multiplexed IHC☆53Updated 9 months ago
- Gpu accelerated vahadane stain normalization for Digital Pathology workflows.☆25Updated last year
- ☆27Updated 8 months ago
- GrandQC tool for tissue detection and quality control in pathology☆65Updated 7 months ago
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆107Updated 2 years ago
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆66Updated 2 years ago
- Tools to build deep learning pipelines.☆109Updated 10 months ago
- Efficient Approach for Guided Local Examination in Digital Pathology☆26Updated 5 months ago
- ☆118Updated last year