mahmoodlab / Patho-BenchLinks
Standardized benchmark for computational pathology foundation models.
☆99Updated last month
Alternatives and similar repositories for Patho-Bench
Users that are interested in Patho-Bench are comparing it to the libraries listed below
Sorting:
- Multimodal prototyping for cancer survival prediction - ICML 2024☆92Updated 6 months ago
- Feather - Lightweight supervised slide foundation models (ICML 2025)☆89Updated last month
- Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024☆139Updated 6 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆108Updated 11 months ago
- Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024☆147Updated 9 months ago
- [MICCAI 2023 Oral] The official code of "Pathology-and-genomics Multimodal Transformer for Survival Outcome Prediction" (top 9%)☆97Updated 6 months ago
- Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)☆81Updated last year
- Solid Tumor Associative Modeling in Pathology☆85Updated this week
- List of pathology feature extractors and foundation models☆151Updated 3 months ago
- Awesome List of Digital and Computational Pathology Resources☆74Updated 8 months ago
- This repo provides the pipeline of processing TCGA whole-slide images for downstream pathology analysis.☆75Updated 5 months ago
- Analysis of 3D pathology samples using weakly supervised AI - Cell☆105Updated 7 months ago
- TCGA Pathology Reports in Machine Readable Text☆50Updated last year
- A transformer-based weakly supervised computational pathology method for clinical-grade diagnosis and molecular state revelation of gliom…☆36Updated 9 months ago
- Visual Language Pretrained Multiple Instance Zero-Shot Transfer for Histopathology Images - CVPR 2023☆105Updated 2 years ago
- ☆27Updated 7 months ago
- Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis☆32Updated last year
- DAS-MIL: Distilling Across Scales for MILClassification of Histological WSIs☆61Updated 9 months ago
- MADELEINE: multi-stain slide representation learning (ECCV'24)☆59Updated 6 months ago
- Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021☆155Updated last year
- ☆55Updated 2 years ago
- Toolkit for large-scale whole-slide image processing.☆355Updated last week
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆66Updated 2 years ago
- Repository for the Giga-SSL paper☆25Updated 11 months ago
- This package provides tools for training supervised machine learning models for computational pathology tasks using tile-level embeddings…☆40Updated 4 months ago
- ☆114Updated last year
- Histopathology Slides Preprocessing Pipeline☆42Updated 6 months ago
- Code associated to the publication: Scaling self-supervised learning for histopathology with masked image modeling, A. Filiot et al., Med…☆158Updated last year
- Efficient Approach for Guided Local Examination in Digital Pathology☆25Updated 4 months ago
- GrandQC tool for tissue detection and quality control in pathology☆63Updated 6 months ago