DigitalSlideArchive / HistomicsStream
A whole-slide image reader for TensorFlow
☆23Updated 5 months ago
Alternatives and similar repositories for HistomicsStream:
Users that are interested in HistomicsStream are comparing it to the libraries listed below
- A Girder plugin for pathology image annotations and analysis.☆67Updated last week
- The official deployment of the Digital Slide Archive and HistomicsTK.☆118Updated this week
- An optimized pipeline for working with Whole Slide Image (WSI) data in Tensorflow☆15Updated 3 years ago
- A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.☆15Updated last week
- a toolbox for manipulation of digital pathology slides and annotations☆19Updated 4 years ago
- ☆21Updated last month
- Interactive deep learning whole-cell segmentation and thresholding using partial annotations☆36Updated this week
- An open-source digital pathology based rapid image annotation tool☆76Updated last week
- TiffSlide - cloud native openslide-python replacement based on tifffile☆97Updated 3 weeks ago
- Intelligent data partitioning using quality control metrics☆18Updated 4 months ago
- 🔬 Code-free deep segmentation for computational pathology☆53Updated 9 months ago
- Delete the label from a whole-slide image☆63Updated 4 years ago
- Quality control of whole-slide images through multi-class semantic segmentation of artifacts☆30Updated last year
- Lazily load multiscale whole-slide images with openslide and dask☆33Updated 2 years ago
- Whole Slide image (WSI) conversion for brightfield histology images☆36Updated 3 weeks ago
- Hands-on Sessions 1 and 2 at the Building Interpretable AI for Digital Pathology AMLD workshop 2021☆21Updated 3 years ago
- GPU-accelerated image processing in QuPath☆15Updated 3 years ago
- ☆62Updated this week
- iSyntax to raw format converter☆21Updated last year
- A human in the loop solution to machine learning for pathologists (easy semantic segmentation of WSI)☆51Updated 4 years ago
- Python wrapper library for PMA.start, a universal viewier for whole slide imaging and microscopy☆30Updated 3 months ago
- Package using StarDist and Python that performs object detection and spatial analysis on H&E images☆3Updated 4 months ago
- Python 3 library for the augmentation & normalization of H&E images☆52Updated 2 years ago
- Extension to QuPath application adding support for reading from Google Cloud Healthcare API.☆22Updated 3 years ago
- A tool for rapidly labeling objects using deep learning feature embedding☆31Updated 7 months ago
- Framework for registration of sequential digitized histology slices☆28Updated 3 years ago
- ☆22Updated last year
- multimodal whole slide image registration in a graph structure☆81Updated 8 months ago
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- ☆14Updated 11 months ago