Alternatives and similar repositories for ITPP:

Users that are interested in ITPP are comparing it to the libraries listed below

• vals / python-gprofiler
  ☆12Updated 6 years ago
• JasonJWilliamsNY / 2018_nih_datascience_rfi
  This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science
  ☆16Updated 7 years ago
• vals / Reading-PCA
  ☆16Updated 7 years ago
• vals / scilife-python-course
  ☆20Updated 12 years ago
• cjprybol / reproducibility-via-singularity
  A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
  ☆26Updated 8 years ago
• lmweber / diffcyt
  R package for differential discovery analyses in high-dimensional cytometry data
  ☆20Updated 2 months ago
• gmiaslab / pyiomica
  PyIOmica (pyiomica) is a Python package for omics analyses.
  ☆15Updated 2 years ago
• YeoLab / qtools
  qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python
  ☆21Updated last year
• ismms-himc / visium-clustergrammer2
  Spatial Transcriptomics Dashboard
  ☆28Updated last year
• michaelbarton / bioinformatics-career-survey
  Survey of bioinformatics field
  ☆26Updated 13 years ago
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆24Updated last year
• ebecht / hypergate
  ☆13Updated last year
• theandygross / TCGA
  ☆36Updated 7 years ago
• greenelab / GCB535
  Materials for GCB535 at Penn.
  ☆20Updated 6 years ago
• SnakeChunks / SnakeChunks
  Modular blocks to build Snakemake workflows for reproducible NGS analyses
  ☆22Updated 5 years ago
• schlegelp / bioRxiv-LaTeX-template
  LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org
  ☆21Updated 9 years ago
• flo-compbio / monet
  Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces
  ☆39Updated 3 years ago
• NCBI-Hackathons / Network_SNPs
  A framework for network analysis and display of SNPs
  ☆19Updated 8 years ago
• broadinstitute / dropviz
  Shiny app for visualization, exploration of mouse brain single cell gene expression
  ☆11Updated 6 years ago
• olgabot / kvector
  kvector is a small utility for converting motifs to kmer vectors to compare motifs of different lengths
  ☆10Updated 7 years ago
• gexijin / iDEP-old-version
  iDEP: integrated Differential Expression & Pathway analysis
  ☆15Updated 6 years ago
• Bioconductor / TENxBrainAnalysis
  R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics
  ☆12Updated 2 years ago
• hbc / NGS-Data-Analysis-long-course
  ☆11Updated 7 years ago
• ismms-himc / codex_dashboard
  Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
  ☆17Updated last year
• drisso / archive-RUVSeq
  Archived version of RUVSeq
  ☆8Updated 8 years ago
• fmi-basel / glib-nature2018-materials
  Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"
  ☆11Updated 4 years ago
• StatGenPRD / STOPGAP
  Scripts for generating integrated dataset from publically available data sources to evaluate known genetic associations evidence of varyi…
  ☆11Updated 4 years ago
• WarrenWeckesser / heatmapcluster
  A python library for generating a clustered heatmap with dendrograms.
  ☆32Updated 3 years ago
• fperraudeau / singlecellworkflow
  Tutorial for the analysis of scRNA-seq data in R
  ☆18Updated 6 years ago
• karinsasaki / python-workshop-image-processing
  Using Python for image processing and analysis
  ☆32Updated 7 years ago