ParkerICI / premessaView external linksLinks
R package for pre-processing of mass and flow cytometry data
☆47Sep 6, 2022Updated 3 years ago
Alternatives and similar repositories for premessa
Users that are interested in premessa are comparing it to the libraries listed below
Sorting:
- A tutorial for the analysis of high-dimensional flow cytometry data☆27Aug 28, 2019Updated 6 years ago
- bead-based normalization of mass cytometry data☆13May 26, 2018Updated 7 years ago
- R package for analysis of single-cell data using graphs☆10Jun 8, 2023Updated 2 years ago
- R library to normalize cytometry data☆39Jan 16, 2026Updated last month
- Cytofin-an R package for CyTOF data integration☆11Jan 13, 2022Updated 4 years ago
- scaffold☆18Aug 13, 2018Updated 7 years ago
- ☆14Jan 16, 2024Updated 2 years ago
- R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data☆45Feb 15, 2017Updated 9 years ago
- ☆18Mar 15, 2017Updated 8 years ago
- kallisto index tag extractor☆20Jul 6, 2019Updated 6 years ago
- R package for working with CyToF data☆27May 11, 2020Updated 5 years ago
- Course Website☆289Updated this week
- R package for differential discovery analyses in high-dimensional cytometry data☆23Feb 8, 2025Updated last year
- A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry and imaging data.☆69Sep 19, 2025Updated 4 months ago
- cytofkit: an integrated flow/mass cytometry data analysis pipeline☆60Dec 17, 2020Updated 5 years ago
- A shiny app for metacell analysis☆10Oct 19, 2025Updated 3 months ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 3 years ago
- SPADE: Spanning Tree Progression of Density Normalized Events☆49Aug 23, 2016Updated 9 years ago
- Robust Integration of Single-Cell Cytometry Datasets☆32Aug 29, 2025Updated 5 months ago
- Marker Enrichment Modeling (MEM)☆12Nov 22, 2021Updated 4 years ago
- Cytometry by time-of-flight(CyTOF) data is very useful in studying the presence/absence of antigens/surface markers at single cell level.…☆14Jun 1, 2020Updated 5 years ago
- Spectral unmixing of highly mixed multispectral flow and image cytometry data.☆16Mar 15, 2023Updated 2 years ago
- A GatingML Interface for Cross Platform Cytometry Data Sharing☆33Updated this week
- ☆38Mar 24, 2023Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆17Jan 8, 2026Updated last month
- COMET Single-Cell Marker Detection tool☆32Jun 21, 2022Updated 3 years ago
- Cytometry dATa anALYsis Tools☆75Nov 20, 2025Updated 2 months ago
- Kernel k Nearest Neighbors in R☆17Feb 1, 2026Updated 2 weeks ago
- Amplicon Sequencing Analysis Pipeline☆18Sep 12, 2025Updated 5 months ago
- Parallel opt-SNE implementation with Python wrapper☆38Jun 23, 2022Updated 3 years ago
- Subpopulation detection in high-dimensional single-cell data☆141Oct 22, 2020Updated 5 years ago
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆19May 14, 2020Updated 5 years ago
- ☆16Apr 17, 2024Updated last year
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- Genotype-free demultiplexing of pooled single-cell RNA-Seq, using a hidden state model for identifying genetically distinct samples withi…☆41Feb 8, 2023Updated 3 years ago
- A study to compare methods for clustering of scRNA-seq data☆45Jul 19, 2024Updated last year
- Clone of the Bioconductor repository for the batchelor package.☆18Mar 13, 2025Updated 11 months ago
- ☆20Mar 28, 2017Updated 8 years ago
- Wishbone is an algorithm to align cells along developmental trajectories with branches☆42Feb 8, 2020Updated 6 years ago