ParkerICI / premessaLinks
R package for pre-processing of mass and flow cytometry data
☆46Updated 3 years ago
Alternatives and similar repositories for premessa
Users that are interested in premessa are comparing it to the libraries listed below
Sorting:
- Single Cell Cluster Evaluation☆98Updated 4 years ago
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Updated 3 years ago
- Code for evaluation of differential expression methods in single-cell RNA-seq data☆112Updated 5 years ago
- Detect doublets in single-cell RNA-seq data☆86Updated 6 years ago
- Framework for sensitive DE testing (using neighbourhoods)☆75Updated last week
- ☆48Updated 7 years ago
- Bioconductor workshop: Analysis of single-cell RNA-seq data with R and Bioconductor☆80Updated 9 years ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆58Updated 2 years ago
- HMM-integrated Bayesian approach for detecting CNV and LOH events from single-cell RNA-seq data☆99Updated 4 years ago
- Clone of the Bioconductor repository for the scran package.☆45Updated last year
- Inferring, interpreting and visualising trajectories using a streamlined set of packages 🦕☆183Updated 4 years ago
- Mouse cell atlas☆61Updated 5 years ago
- Framework for clustering, phenotyping, pseudotiming and inferring gene regulatory networks from single cell data☆107Updated 2 years ago
- Automated cell type classification☆114Updated 10 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- Doublet detection in single-cell RNA-seq data.☆94Updated 9 months ago
- ☆74Updated 2 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆85Updated last year
- ☆69Updated 7 years ago
- Linear trajectory inference for single-cell RNA-seq☆61Updated last year
- Visualization of scRNA-seq data.☆99Updated 3 years ago
- ☆71Updated last year
- A collection of 50+ trajectory inference methods within a common interface 📥📤☆131Updated last year
- An R-based interface for loom files☆67Updated 5 years ago
- Infer cell types in scRNA-seq data using bulk RNA-seq or gene sets☆123Updated 7 months ago
- Fast Wilcoxon and auROC☆195Updated last year
- R package for semi-supervised single-cell data integration☆90Updated 3 months ago
- ☆37Updated 9 years ago
- Clone of the Bioconductor repository for the DropletUtils package.☆62Updated 2 months ago
- A Shiny web app for mapping datasets using Seurat v4☆138Updated last year