hally166 / R_flowcytometry_course
The files and presentation from the Cytometry Core Facility flow cytometry data analysis course in R
☆21Updated 5 years ago
Related projects ⓘ
Alternatives and complementary repositories for R_flowcytometry_course
- Testing differences in cell type proportions from single-cell data.☆94Updated last week
- Easily install and load packages from the tidyomcis ecosystem☆63Updated 8 months ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆89Updated this week
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆58Updated 4 months ago
- published papers with a lot of data☆62Updated this week
- An R interface to enrichR☆77Updated 8 months ago
- ☆98Updated 2 weeks ago
- A Shiny web app for mapping datasets using Seurat v4☆113Updated 2 weeks ago
- ☆56Updated 4 years ago
- ☆60Updated last year
- Framework for sensitive DE testing (using neighbourhoods)☆59Updated 4 months ago
- Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.☆117Updated 4 years ago
- The package wrapping the book, for deployment via the Bioconductor build system.☆79Updated 3 weeks ago
- This is where TOG houses all of its workshop scripts, as well as details on its upcoming workshops and seminars.☆41Updated 5 months ago
- ☆56Updated 6 months ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆75Updated last year
- Easy single cell analysis platform for enrichment☆150Updated this week
- Using TCR and expression for sequence embedding☆48Updated 3 weeks ago
- SIB course on single cell transcriptomics by mostly using the Seurat pipeline☆78Updated 3 weeks ago
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆88Updated last year
- Detect doublets in single-cell RNA-seq data☆35Updated 5 years ago
- Updated implementation of the GSEA-P R application for modern R distributions☆94Updated 2 years ago
- An S3 data object and framework for common quantitative proteomic analyses☆36Updated last month
- Latent Embedding Multivariate Regression☆82Updated this week
- Generate high quality, publication ready visualizations for single cell transcriptomics data.☆158Updated 3 months ago
- R package to access DoRothEA's regulons☆133Updated 9 months ago
- My youtube programming scripts☆39Updated this week
- ☆68Updated 2 years ago
- Code and data repository for the 2020 physalia course on single cell RNA sequencing.☆57Updated 4 years ago