greenelab / multi-plierLinks
An unsupervised transfer learning approach for rare disease transcriptomics
☆45Updated 5 years ago
Alternatives and similar repositories for multi-plier
Users that are interested in multi-plier are comparing it to the libraries listed below
Sorting:
- Moana: Robust cell type classification of single-cell RNA-Seq data☆24Updated 6 years ago
- easy access to benchmark datasets☆50Updated 6 years ago
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆49Updated last year
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆33Updated 7 years ago
- Modelling DNA methylation profiles☆23Updated 4 years ago
- ☆22Updated 5 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆32Updated 3 months ago
- ☆29Updated 2 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- Tied Diffusion for Subnetwork Discovery (TieDIE)☆37Updated 3 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆57Updated 4 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- User-submitted RNA-seq data analysis tools for BioJupies.☆20Updated 4 years ago
- Annotation of genomic regions using transcription factor binding sites and epigenetic data☆40Updated 3 years ago
- Multi-omics studies are available here☆51Updated 2 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Updated 6 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- Pathway-Level Information Extractor (PLIER): a generative model for gene expression data☆54Updated 9 months ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- Deep Feature Interaction Maps (DFIM)☆53Updated 6 years ago
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Updated 4 years ago
- Code and manuscript files for Aaron and Karsten's deconvolution paper.☆16Updated 6 years ago
- Single cell RNA Seq data analysis with quantitative phenotypes☆14Updated 4 years ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆17Updated 5 years ago
- Single-cell exploratory data analysis for RNA-Seq☆40Updated 4 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆27Updated last year
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 6 years ago
- Fit generalized linear models in python.☆27Updated 2 years ago