Description of VCF to aGDS conversion and annotation on the UK Biobank RAP
☆14Sep 29, 2025Updated last year
Alternatives and similar repositories for vcf2agds_overview
Users that are interested in vcf2agds_overview are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Contains code to conduct analyses presented in the IGES 2025 Educational Workshop: Practical Tutorial – A Walkthrough of Cross-Biobank An…☆15Aug 29, 2025Updated last year
- An R package for performing MultiSTAAR procedure in whole-genome sequencing studies☆13Nov 14, 2024Updated last year
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆28Nov 9, 2024Updated last year
- Code used to generate manuscript figures and results.☆14Jan 10, 2024Updated 2 years ago
- An R package for summarizing and visualizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies genera…☆14Oct 16, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Genomics workflows for CPG using Hail Batch☆12Sep 8, 2026Updated last month
- Cross-population fine-mapping☆48Dec 7, 2024Updated last year
- Phenome Exome Association and Correlation Of Key phenotypes☆36Aug 19, 2021Updated 5 years ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆107Oct 2, 2026Updated 3 weeks ago
- ☆17Mar 17, 2023Updated 3 years ago
- Age-dependent topic modelling☆12Mar 27, 2026Updated 6 months ago
- Integrating long read sequencing enhances short read-based locus-specific transposable element quantification☆12May 12, 2025Updated last year
- FulQuant pipeline to identify and quantify transcript isoforms based on Nanopore long-read data☆10Jul 20, 2022Updated 4 years ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ascertained Sequentially Markovian Coalescent☆19Oct 22, 2025Updated last year
- A flexible tool for meta-analysis☆11Jul 31, 2024Updated 2 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆39Sep 17, 2026Updated last month
- Developing efficient Bayesian phylogenetic inference methods☆12Dec 21, 2019Updated 6 years ago
- Gateway to Aging: Spousal Concordance☆10Jun 9, 2023Updated 3 years ago
- ☆13Oct 29, 2025Updated 11 months ago
- ☆13Apr 25, 2026Updated 5 months ago
- Variant Calling for the HPRC2☆19May 26, 2026Updated 4 months ago
- Toolkit for calling and analyzing de novo STR mutations☆17Dec 17, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆18Apr 26, 2026Updated 5 months ago
- This software implements a high-throughput data processing pipeline to identify and charaterize SARS-CoV-2 variant sequences in specimens…☆11Aug 1, 2023Updated 3 years ago
- Effects of Adherence to Mediterranean and MIND Diets, and the Mediating Effect of Metabolites on Risks of Overall and 22 Specific Cancers…☆14Apr 10, 2024Updated 2 years ago
- Genome-wide TR catalog and variation clusters described in [Weisburd, Dolzhenko, et al. 2024]☆20Updated this week
- Create a PheWAS code based phenome using ICD9 and ICD10 data from baskets of the UK biobank☆36Apr 27, 2026Updated 5 months ago
- Proportional Odds Logistic Mixed Model (POLMM) for ordinal categorical data analysis☆12Aug 26, 2022Updated 4 years ago
- Convergent Policy Optimization for Safe Reinforcement Learning☆11Oct 26, 2019Updated 6 years ago
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 3 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆80Oct 2, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- R package for RIVER (RNA-Informed Variant Effect on Regulation)☆12Mar 5, 2020Updated 6 years ago
- Code utilized in the paper "A phenome-wide association and Mendelian randomization study for Alzheimer's disease: a prospective cohort st…☆14Jun 10, 2022Updated 4 years ago
- hJAM is a hierarchical model which unifies the framework of Mendelian Randomization and Transcriptome-wide association studies.☆12Jan 19, 2024Updated 2 years ago
- ☆13Jan 30, 2025Updated last year
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆20Updated this week
- Repository for code to produce phased 1000 Genomes Project haplotypes called against the CHM13v2 T2T reference genome.☆21Oct 12, 2026Updated last week
- ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…☆12Apr 20, 2022Updated 4 years ago