xihaoli / MultiSTAARLinks
An R package for performing MultiSTAAR procedure in whole-genome sequencing studies
☆10Updated 8 months ago
Alternatives and similar repositories for MultiSTAAR
Users that are interested in MultiSTAAR are comparing it to the libraries listed below
Sorting:
- ☆20Updated last year
- Immuological gene typing and annotation for genome assembly☆37Updated 4 months ago
- A mutation rate model at the basepair resolution identifies the mutagenic effect of Polymerase III transcription☆9Updated 11 months ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 8 months ago
- A CNN - based pipeline for calling somatic SNP and INDEL variants without a matched normal☆11Updated 2 years ago
- Copy Number Methods for Detection and Genome Wide Association Tests☆22Updated 8 months ago
- ☆24Updated 7 months ago
- ☆22Updated 5 months ago
- ☆22Updated 2 years ago
- ☆40Updated 7 years ago
- ☆14Updated 2 years ago
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆32Updated 6 months ago
- R Functions to calculate power of GWAS studies for a single associated SNP, under various parameters. Suitable for classical (i.e. single…☆20Updated 7 years ago
- ☆25Updated last month
- Annotation and segmentation of MAS-seq data☆20Updated 2 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …☆26Updated 2 years ago
- PAnno is a Pharmacogenomics Annotation tool for clinical genomic testing.☆14Updated 2 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆33Updated 4 months ago
- ☆28Updated 7 months ago
- R package for applying Gamma-Poisson regression to identify statistical enrichment or depletion of somatic mutations in regions after cor…☆30Updated 2 years ago
- tools to efficiently retrieve and calculate LD☆33Updated 3 years ago
- ☆26Updated last month
- Genotype Representation Graph Library☆35Updated last week
- GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with popula…☆38Updated 3 weeks ago
- ☆13Updated 2 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- ☆23Updated 7 months ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year