Alternatives and similar repositories for SeqArray

Users that are interested in SeqArray are comparing it to the libraries listed below

• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated 7 months ago
• zhanxw / seqminer
  Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R
  ☆30Updated 9 months ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆40Updated last year
• lamortenera / bamsignals
  R package to quickly obtain count vectors from indexed bam files
  ☆15Updated last month
• G3viz / g3viz
  Lollipop-diagram to interactively visualize genetic mutations
  ☆32Updated 10 months ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated 2 months ago
• sigven / pharmOncoX
  Targeted and non-targeted anticancer drugs and drug regimens
  ☆28Updated last week
• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆46Updated 8 months ago
• Bioconductor / Rsamtools
  Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
  ☆28Updated 3 weeks ago
• MonashBioinformaticsPlatform / varistran
  R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data
  ☆21Updated last month
• mikelove / asthma
  RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
  ☆19Updated 7 years ago
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆39Updated 3 years ago
• davemcg / SeeGEM
  Interactive table from gemini output
  ☆10Updated 6 years ago
• friend1ws / pmsignature
  R package for extracting mutation signatures from a list of somatic mutations
  ☆37Updated 5 years ago
• Shians / Glimma
  Glimma R package
  ☆50Updated 10 months ago
• seandavi / SRAdbV2
  R Interface to the NCBI SRA metadata
  ☆23Updated 6 years ago
• lindsayrutter / bigPint
  Bioconductor package that makes BIG data pint-sized.
  ☆21Updated last year
• kkdey / Logolas
  R package for Enrichment Depletion Logos (EDLogos) and String Logos
  ☆27Updated 6 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆25Updated 2 years ago
• ssadedin / variant_calling_pipeline
  A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.
  ☆14Updated 11 years ago
• gladkia / igvShiny
  An htmlwidget version of igv, for RStudio and Shiny apps
  ☆38Updated 8 months ago
• Bioconductor / GenomicRanges
  Representation and manipulation of genomic intervals
  ☆46Updated 3 weeks ago
• nellore / runs
  Scripts for reproducing analyses of large RNA-seq datasets
  ☆15Updated 6 years ago
• corbinq / apex
  Toolkit for QTL mapping and meta-analysis.
  ☆17Updated 3 years ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆26Updated last year
• itsvenu / ALPS
  AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project
  ☆16Updated 2 years ago
• statgen / fivex
  Interactive eQTL visualizations
  ☆13Updated 2 years ago
• annaquaglieri16 / varikondo
  R package to organise and standardise your genomic variant calls obtained with different callers.
  ☆11Updated 6 years ago
• brentp / 450k-analysis-guide
  A Practical (And Opinionated) Guide To Analyzing 450K Data
  ☆35Updated 10 years ago
• gagneurlab / RNAseq-ASHG
  RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows
  ☆17Updated 3 years ago