Alternatives and similar repositories for RibonanzaNet:

Users that are interested in RibonanzaNet are comparing it to the libraries listed below

• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆97Updated 2 weeks ago
• Doudna-lab / GARNET_DL
  ☆36Updated 3 months ago
• chenkenbio / SpliceBERT
  Primary RNA sequence model
  ☆36Updated 11 months ago
• Shujun-He / Nucleic-Transformer
  ☆21Updated 2 years ago
• leeyang / DRfold2
  ☆23Updated 2 weeks ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆46Updated 6 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆39Updated last year
• Shujun-He / RNAdegformer
  ☆20Updated 9 months ago
• kkyamada / bert-rbp
  ☆29Updated 2 years ago
• programmablebio / ptm-mamba
  ☆63Updated 2 weeks ago
• bio-ontology-research-group / deepgozero
  DeepGO with Fuzzy DL
  ☆30Updated 2 years ago
• mana438 / RNABERT
  ☆53Updated last year
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆63Updated last year
• tbepler / prose
  Multi-task and masked language model-based protein sequence embedding models.
  ☆101Updated 3 years ago
• ml4bio / RhoFold
  Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach
  ☆137Updated 2 weeks ago
• rmrao / msa-transformer
  MSA Transformer reproduction code
  ☆80Updated 3 years ago
• robpearc / DeepFoldRNA
  ☆35Updated last year
• hugohrban / ProGen2-finetuning
  Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
  ☆57Updated 2 months ago
• uci-cbcl / UFold
  ☆68Updated last year
• hendrixlab / bpRNA
  bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure
  ☆47Updated last year
• yikunpku / RNA-MSM
  Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…
  ☆61Updated 9 months ago
• sacdallago / biotrainer
  Biological prediction models made simple.
  ☆41Updated 2 weeks ago
• biomed-AI / SPROF-GO
  Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion
  ☆39Updated 9 months ago
• MachineLearningLifeScience / meaningful-protein-representations
  ☆109Updated 3 years ago
• alex-hh / deep-protein-generation
  ☆56Updated 2 years ago
• jaswindersingh2 / SPOT-RNA2
  Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learni…
  ☆29Updated 4 years ago
• biofold / ddgun
  predict stability change upon mutation
  ☆27Updated 9 months ago
• HarveyYan / RNAonGraph
  A repository for neural representational learning of RNA secondary structures
  ☆32Updated 5 years ago
• genbio-ai / ModelGenerator
  AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt…
  ☆47Updated last week
• Shunsuke-1994 / rfamgen
  Code repository of "Deep generative design of RNA family sequences"
  ☆33Updated 9 months ago