structRFM: A fully open structure-guided RNA foundation model for robust structural and functional inference
☆35May 14, 2026Updated 2 weeks ago
Alternatives and similar repositories for structRFM
Users that are interested in structRFM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Protein-Protein Language Model with Novel Attention Mechanisms for Enhanced Inter-Protein Contact and Interaction Prediction☆56Mar 12, 2026Updated 2 months ago
- ☆29Nov 6, 2022Updated 3 years ago
- RNAGenesis: A Generalist Foundation Model for Functional RNA Therapeutics☆33Apr 20, 2026Updated last month
- ☆15Apr 9, 2026Updated last month
- BPfold: Deep generalizable prediction of RNA secondary structure via base pair motif energy.☆35Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- NUPACK is a growing software suite for the analysis and design of nucleic acid structures, devices, and systems.☆14Apr 1, 2021Updated 5 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆65May 8, 2026Updated 3 weeks ago
- ☆22Dec 20, 2024Updated last year
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆20Mar 17, 2024Updated 2 years ago
- ☆12May 20, 2026Updated last week
- ☆11Aug 2, 2024Updated last year
- ☆11Mar 11, 2025Updated last year
- 🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …☆186Apr 8, 2026Updated last month
- RNA Multiple Sequence Alignment☆51Jul 20, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Nature Methods: RNA foundation model (together with RhoFold)☆372May 27, 2025Updated last year
- A small collection of useful tutorials and links☆15Apr 13, 2024Updated 2 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- ☆13Feb 22, 2022Updated 4 years ago
- A fast and accurate RNA secondary structure, end-to-end approach prediction method.☆12Jan 2, 2025Updated last year
- SegMamba-V2☆31Jun 30, 2025Updated 10 months ago
- ☆17Apr 13, 2026Updated last month
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆84May 12, 2026Updated 2 weeks ago
- ☆14Jun 5, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Repository for the UTN BA Data Science Course 2020☆14Jun 28, 2021Updated 4 years ago
- ☆48Jan 28, 2026Updated 4 months ago
- Python script for creating and analyzing simulated bpp datasets published in Flouris et al. 2019.☆10May 12, 2019Updated 7 years ago
- [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models☆62Aug 2, 2024Updated last year
- ☆29Oct 3, 2023Updated 2 years ago
- ☆37Nov 23, 2025Updated 6 months ago
- Draw RNA secondary structures in python.☆52Jun 24, 2025Updated 11 months ago
- Tensors and Dynamic neural networks in Python with strong GPU acceleration☆18Jul 11, 2025Updated 10 months ago
- Prototype of fraud proofs.☆12Feb 13, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆14Jul 9, 2023Updated 2 years ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Geometric deep learning of protein–DNA binding specificity☆78Mar 19, 2025Updated last year
- ☆20Oct 18, 2024Updated last year
- ☆22Jan 29, 2024Updated 2 years ago
- ☆11Jan 25, 2022Updated 4 years ago
- Deep learning to solve RNA design puzzles☆20Feb 4, 2025Updated last year