SVG based genome viewer written in javascript using D3
☆33Jul 12, 2015Updated 10 years ago
Alternatives and similar repositories for islandplot
Users that are interested in islandplot are comparing it to the libraries listed below
Sorting:
- Abbreviate strings to short, unique identifiers☆24May 10, 2022Updated 3 years ago
- Build an index for your BAM Index (BAI)☆17Apr 14, 2015Updated 10 years ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 3 years ago
- Bloom filter implementation in Nimrod☆16May 26, 2023Updated 2 years ago
- Color DNA/RNA bases in terminal output☆21Aug 29, 2017Updated 8 years ago
- PCA in rust☆16Jul 30, 2023Updated 2 years ago
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 7 years ago
- http://www.combio.pl/alfree☆23Jun 14, 2022Updated 3 years ago
- A collection of CSV/TSV Utilities☆13Jun 2, 2020Updated 5 years ago
- Demonstrating the PRoot program☆11Jul 29, 2016Updated 9 years ago
- Variant Alert!, a framework to monitor every significant alteration in variant classification and gene-disease association between two ve…☆14Jul 19, 2021Updated 4 years ago
- Detects human contamination in bam files☆16Sep 10, 2020Updated 5 years ago
- in silico plasmid extraction☆13Sep 18, 2017Updated 8 years ago
- Library for visualising genomic features in Python.☆15May 12, 2017Updated 8 years ago
- SVG based genome viewer written in javascript using D3☆68Mar 14, 2018Updated 7 years ago
- Fast alignment-free pangenome creation and exploration☆28Apr 16, 2020Updated 5 years ago
- Variant call adjudication☆16Jun 13, 2024Updated last year
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆19Mar 24, 2019Updated 6 years ago
- ☆22Jul 28, 2022Updated 3 years ago
- A pipeline to assess the quantification of transcripts.☆19Jun 6, 2022Updated 3 years ago
- miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.☆182Nov 26, 2018Updated 7 years ago
- ☆21Dec 26, 2025Updated 2 months ago
- ☆15Aug 14, 2020Updated 5 years ago
- ☆90Feb 18, 2019Updated 7 years ago
- Parallel Block GZIP☆50Aug 4, 2016Updated 9 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆40Jan 7, 2026Updated last month
- Easy genomic regions for short-read variant calling☆45Sep 10, 2025Updated 5 months ago
- Dockerfile for Nim lang☆20Jan 23, 2021Updated 5 years ago
- Library for indexing VCF files for random access searches by rsID☆17Feb 2, 2026Updated 3 weeks ago
- Aligner for sequencing data☆18Feb 13, 2018Updated 8 years ago
- De novo assembly based variant calling pipeline for Illumina short reads☆110Nov 30, 2020Updated 5 years ago
- A C library for handling bigWig files☆81Jan 17, 2025Updated last year
- zero-inflated negative binomial gene expression in R☆20Jan 31, 2018Updated 8 years ago
- Annotate non-coding regulatory vars using our GREEN-DB, prediction scores, conservation and pop AF☆20Jun 13, 2025Updated 8 months ago
- Interactive in-browser track viewer☆280Oct 26, 2021Updated 4 years ago
- Python scripts for Exploratory Data Analysis of Pacific Biosciences sequence data☆18Aug 13, 2014Updated 11 years ago
- Repo for advertising and organizing CIViC unconference/meeting activities☆10Jul 24, 2025Updated 7 months ago
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Jun 28, 2017Updated 8 years ago
- Structural variant (SV) analysis tools☆40Jul 1, 2024Updated last year