Illumina / Isaac3
Aligner for sequencing data
☆18Updated 6 years ago
Related projects: ⓘ
- Analysis Framework for Biological Data from High Throughput Experiments☆34Updated 8 years ago
- HGVS variant description extractor☆11Updated 4 years ago
- Aligner for sequencing data☆21Updated 8 years ago
- robust matching of small variant datasets using flexible scoring schemes☆10Updated 4 years ago
- HPG Aligner is an ultrafast and highly sensitive Next-Generation Sequencing (NGS) mapper which supoprts both DNA and RNA alignment☆34Updated 7 years ago
- Readshift: A method to shift high-quality NGS datasets into noisy datasets☆0Updated 5 years ago
- reference free variant assembly☆32Updated last year
- Wrapper for RTG's vcfeval; DEPRECATED!☆21Updated 8 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆23Updated 8 years ago
- Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.☆47Updated 5 years ago
- Docker images of bioinformatics software☆21Updated 7 years ago
- Graphite - Graph-based variant adjudication☆28Updated 3 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆10Updated 5 years ago
- Workflow Description Language (WDL) scripts for common vg workflows☆16Updated this week
- Scalable mpi aligner base on BWA☆7Updated 4 years ago
- Toil workflows for common genomic pipelines☆32Updated 4 years ago
- Stupid Simple Structural Variant View☆25Updated 7 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Compare assembly graph file formats☆15Updated 9 years ago
- Symmetric DUST for finding low-complexity regions in DNA sequences☆31Updated last year
- Genome-wide reconstruction of complex structural variants☆40Updated 2 years ago
- The gkno launcher for executing tools or pipelines☆32Updated 7 years ago
- PopSTR - A Population based microsatellite genotyper☆31Updated 10 months ago
- DNA assembler developed on FER (Croatia), RBI (Croatia) and GIS (Singapore)☆18Updated 8 years ago
- Reference-free variant discovery in large eukaryotic genomes☆41Updated 3 years ago
- R tools to interact with hap.py output☆15Updated 5 years ago
- CRAM format specification and java API for read data.☆58Updated 5 years ago
- What is true, thank you, ernestly. A large variant benchmarking tool analogous to hap.py for small variants.☆28Updated last year
- Somatic (mosaic) SNV caller for 10X Genomics data using random forest classification and feature-based filters☆24Updated 5 years ago
- Sort Linked Read DNA Into Fragment Specific Clusters☆11Updated 2 years ago