Notes on ChIP-seq and other-seq-related tools
☆26Feb 6, 2026Updated 4 months ago
Alternatives and similar repositories for ChIP-seq_notes
Users that are interested in ChIP-seq_notes are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repository for the Epigenomics Tutorial hold at ISMB 2017 in Prague☆14Aug 19, 2020Updated 5 years ago
- ☆10Apr 30, 2019Updated 7 years ago
- RNA-seq analysis scripts☆18Jan 8, 2026Updated 5 months ago
- ATACseqQC tutorials for BioC 2019 workshop☆19Jul 28, 2020Updated 5 years ago
- ATAC-seq processing pipeline☆34Apr 8, 2022Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.☆207Feb 27, 2026Updated 3 months ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆26Nov 17, 2022Updated 3 years ago
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆15Feb 13, 2018Updated 8 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 4 years ago
- Data science in R notes☆15Apr 28, 2025Updated last year
- Differential Hi-C Data Analysis Workshop https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.76☆15Apr 10, 2021Updated 5 years ago
- A continually expanding collection of microbiome analysis tools☆19May 25, 2026Updated 2 weeks ago
- Bioinformatics and genomics resources☆89Jan 5, 2026Updated 5 months ago
- ☆58Jun 2, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Links to ATAC-seq analysis tools☆78Aug 24, 2021Updated 4 years ago
- Workshop content for http://dib-training.readthedocs.org/en/pub/2016-01-13-adv-beg-shell.html☆13Feb 23, 2018Updated 8 years ago
- Nextflow workflow for automatic repeat detection, classification and masking☆13Feb 19, 2018Updated 8 years ago
- Atac-seq QC matrix☆22Jun 4, 2024Updated 2 years ago
- RNAseq analysis in R workshop, originally taught: http://combine-australia.github.io/2016-05-11-RNAseq/☆24Dec 1, 2020Updated 5 years ago
- R package: Manifold learning in R☆14Apr 7, 2020Updated 6 years ago
- Brain-related -omics data☆28Mar 21, 2026Updated 2 months ago
- A DL-based framework for sequence and shape motif identification in the human genome☆12May 26, 2023Updated 3 years ago
- Mean Alterations Using Discrete Expression☆14Apr 9, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Short Course to get Bioinformaticians at CRUK-CI up-to-speed on Docker☆12Nov 11, 2016Updated 9 years ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- An R package providing datasets useful for testing clustering algorithms☆17Apr 11, 2018Updated 8 years ago
- Detecting sites of genomic enrichment☆201May 8, 2023Updated 3 years ago
- Notes on single-cell Hi-C technologies, tools, and data☆89Feb 28, 2026Updated 3 months ago
- Notes on SNP-related tools and genome variation analysis☆29May 23, 2026Updated 2 weeks ago
- Tool for analyzing the inter-mutational distances between SNV-SNV and INDEL-INDEL mutations. Tool separates mutations into clustered and …☆14May 8, 2026Updated last month
- Introductory bioinformatics course☆26Mar 14, 2025Updated last year
- ☆15Oct 9, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Bowtie2's manual in Chinese - Bowtie2中文使用手册☆12Nov 25, 2015Updated 10 years ago
- ChIP-seq analysis notes from Ming Tang☆850Aug 5, 2024Updated last year
- ATAC-seq lab for BIOINF525☆10Mar 31, 2016Updated 10 years ago
- 😠 Jupyter Widget bindings for UpSet.js for rendering UpSet plots, Euler, and Venn Diagrams☆14Jan 17, 2026Updated 4 months ago
- ChIP-seq and ATAC-seq analysis☆13Jun 17, 2024Updated last year
- Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq☆48Feb 7, 2019Updated 7 years ago
- ☆11Dec 20, 2024Updated last year