Alternatives and similar repositories for idepGolem

Users that are interested in idepGolem are comparing it to the libraries listed below

• saezlab / transcriptutorial
  This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
  ☆55Updated 2 years ago
• OlgaVT / Alternative-Splicing-Tools
  A list of alternative splicing analysis resources
  ☆44Updated 3 months ago
• crazyhottommy / compbio_resources_chatomics
  ☆27Updated 2 years ago
• ucdavis-bioinformatics-training / 2017_2018-single-cell-RNA-sequencing-Workshop-UCD_UCB_UCSF
  2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF
  ☆36Updated 7 years ago
• liulab-dfci / MAGeCK
  Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent gen…
  ☆30Updated 4 years ago
• liulab-dfci / RIMA_pipeline
  ☆81Updated last year
• crazyhottommy / compbio_tutorials
  My youtube programming scripts
  ☆53Updated 5 months ago
• WCSCourses / SingleCell_23
  Hands-on training on the latest methodologies and applications for the analysis of nucleic acids from eukaryotic single cells
  ☆16Updated 11 months ago
• quadbio / RNAseq_tutorial
  ☆28Updated 8 months ago
• PierreBSC / Viral-Track
  ☆57Updated 4 years ago
• bioinfocz / scdrake
  A pipeline for droplet-based single-cell RNA-seq data secondary analysis implemented in the drake Make-like pipeline toolkit for the R la…
  ☆11Updated 8 months ago
• nf-core / scdownstream
  A single cell transcriptomics pipeline for QC, integration and making the data presentable
  ☆66Updated 2 weeks ago
• mdozmorov / ChIP-seq_notes
  Notes on ChIP-seq and other-seq-related tools
  ☆26Updated 5 months ago
• Teichlab / cell2tcr
  Inference of TCR motifs
  ☆32Updated last week
• hamidghaedi / Enrichment-Analysis
  From RNA-seq raw reads to enriched pathways by DEGs
  ☆32Updated last year
• GoekeLab / proActiv
  Estimation of Promoter Activity from RNA-Seq data
  ☆53Updated 3 years ago
• ratschlab / pancanatlas_code_public
  Public repository containing research code for the TCGA PanCanAtlas Splicing project
  ☆41Updated 4 years ago
• sandberg-lab / Smart-seq3
  Code and analysis pipeline for Smart-seq3 (Hagemann-Jensen et al. 2020).
  ☆52Updated 3 years ago
• Danko-Lab / proseq2.0
  Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing
  ☆28Updated 6 months ago
• uc-bd2k / GREIN
  GREIN : GEO RNA-seq Experiments Interactive Navigator
  ☆50Updated 6 years ago
• BaderLab / Cytoscape_workflows
  collection of notebooks with different cytoscape workflows
  ☆50Updated 2 years ago
• broadinstitute / Celligner_ms
  Code related to the Celligner manuscript
  ☆46Updated 4 years ago
• mhorlbeck / ScreenProcessing
  ☆64Updated last year
• xryanglab / RiboMiner
  a toolset for mining multi-dimensional features of the translatome with ribosome profiling data
  ☆18Updated 5 months ago
• rajewsky-lab / find_circ2
  Find circRNAs in RNA-seq data.
  ☆14Updated 8 years ago
• hukai916 / scATACpipe
  ☆27Updated 8 months ago
• broadinstitute / gistic2
  Genomic Identification of Significant Targets in Cancer (GISTIC), version 2
  ☆51Updated 3 years ago
• crazyhottommy / papers_with_data_to_mine
  published papers with a lot of data
  ☆72Updated 2 months ago
• sjroth / ARTDeco
  ☆20Updated last year
• WubingZhang / MAGeCKFlute
  Integrative analysis pipeline for pooled CRISPR functional genetic screens
  ☆30Updated last year