kimrutherford / EMBOSSLinks
MIRROR OF: The European Molecular Biology Open Software Suite (from git://anonscm.debian.org/debian-med/emboss.git)
☆29Updated 3 years ago
Alternatives and similar repositories for EMBOSS
Users that are interested in EMBOSS are comparing it to the libraries listed below
Sorting:
- small RNA analysis from NGS data☆37Updated last year
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 4 months ago
- SeqMonk NGS visualisation and analysis tool☆50Updated last month
- Parse GFF3 into Pandas dataframes☆30Updated last year
- Protein Alignment and Detection Interface☆60Updated last year
- ☆36Updated 8 months ago
- Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for a…☆51Updated 7 years ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- Maximum likelihood demultiplexing☆50Updated 10 months ago
- A pipeline for preprocessing NGS data from Illumina, Nanopore and PacBio technologies☆35Updated last year
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated last month
- gatk4 RNA variant calling pipeline☆56Updated 2 weeks ago
- Detection of incorrectly labeled sequences across kingdoms☆87Updated 3 years ago
- Workflow management with Nextflow and nf-core☆27Updated 11 months ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- de novo assembly of RNA-seq data using ABySS☆34Updated 2 years ago
- ☆38Updated last month
- 180+ Java applications for analyzing next generation sequencing data from ChIPSeq, RNASeq, BisSeq, DNASeq, variant annotation/ filtering,…☆18Updated last month
- Automatically exported from code.google.com/p/prank-msa☆30Updated last month
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated last month
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- A python package and a set of shell commands to handle GTF files☆50Updated last week
- SOAPdenovo-Trans, a de novo transcriptome assembler designed specifically for RNA-Seq. We evaluated its performance on transcriptome data…☆36Updated 2 years ago
- A versatile toolkit for k-mers with taxonomic information☆81Updated 4 months ago
- Combine reference and assembled transcriptomes for RNA-Seq analysis☆22Updated 5 years ago
- Error correction for Illumina RNA-seq reads☆67Updated last year
- BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale☆56Updated 2 years ago