pcingola / SnpSiftLinks
☆38Updated last month
Alternatives and similar repositories for SnpSift
Users that are interested in SnpSift are comparing it to the libraries listed below
Sorting:
- Tools for next-generation sequencing analysis☆89Updated 6 years ago
- Maximum likelihood demultiplexing☆50Updated 10 months ago
- Haplotype, isoform and gene level expression analysis using multi-mapping RNA-seq reads☆68Updated last year
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 7 years ago
- Validate FastQ Files☆36Updated 7 years ago
- ☆63Updated 5 years ago
- Tools for bam file processing☆55Updated 10 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆59Updated 8 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- NextSeq specific bcl2fastq2 wrapper.☆55Updated 4 years ago
- utilities for working with IGV: opening files remotely in either desktop IGV or a web viewer (igv.js), creating screenshots, etc.☆49Updated 6 years ago
- simple library for dealing with SAM cigar strings☆41Updated 4 years ago
- a wee tool for random access into BGZF files.☆85Updated 7 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 3 years ago
- conda recipes for genomic data☆84Updated 4 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆39Updated 4 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated 3 weeks ago
- SeqMonk NGS visualisation and analysis tool☆50Updated last month
- A collection of modules and sub-workflows for Nextflow☆28Updated 2 months ago
- Please consider using/contributing to https://github.com/nf-core/sarek☆41Updated 4 years ago
- De novo transcriptome assembler for short reads☆64Updated 7 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆57Updated last week
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- A fast Python library for VCF files leveraging Cython for speed.☆52Updated 7 years ago
- Gene Fusion Visualiser☆51Updated 2 years ago
- Flash2 has some improvements from flash_1 including new logic from innie and outie overlaps as well as some initial steps for flash for a…☆51Updated 7 years ago
- ☆78Updated 11 years ago
- High-performance error correction for Illumina resequencing data☆74Updated 9 years ago
- Browser based application for viewing bam alignments☆56Updated 9 years ago
- Very simple, pure python, BAM file reader☆79Updated 6 years ago