grenaud / deMLLinks
Maximum likelihood demultiplexing
☆47Updated 6 months ago
Alternatives and similar repositories for deML
Users that are interested in deML are comparing it to the libraries listed below
Sorting:
- ☆95Updated 2 years ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆88Updated 10 months ago
- ☆63Updated 4 years ago
- BigWig and BAM utilities☆97Updated last year
- ☆78Updated 11 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆122Updated 3 months ago
- Software for clustering de novo assembled transcripts and counting overlapping reads☆72Updated 3 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆50Updated 5 years ago
- De novo transcriptome assembler for short reads☆63Updated 7 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago
- Remove primer sequence from BAM alignments by soft-clipping☆31Updated 5 years ago
- Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago
- Mapped QC analysis program☆44Updated 7 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated 3 months ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)☆143Updated this week
- A catalogue of available long read sequencing data analysis tools☆79Updated 5 months ago
- parallelized blat with multi-threads support☆53Updated 7 months ago
- 10x Genomics Linked-Read Diploid De Novo Assembler☆65Updated 6 years ago
- MetaSV: An accurate and integrative structural-variant caller for next generation sequencing☆57Updated 8 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Updated last year
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 4 years ago
- Evolutionary Transcriptomics with R☆45Updated last week
- Splice junction analysis and filtering from BAM files☆40Updated 3 years ago
- An awk-like VCF parser☆56Updated last year
- Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …☆56Updated 5 years ago
- Tip and tricks for BAM files☆86Updated 7 years ago
- Tools and software library developed by the ONT Applications group☆63Updated 4 years ago
- High-performance error correction for Illumina resequencing data☆72Updated 9 years ago