grenaud / deMLLinks
Maximum likelihood demultiplexing
☆47Updated 8 months ago
Alternatives and similar repositories for deML
Users that are interested in deML are comparing it to the libraries listed below
Sorting:
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- ☆95Updated 3 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆88Updated last year
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- Mapped QC analysis program☆44Updated 7 years ago
- ☆63Updated 4 years ago
- BigWig and BAM utilities☆98Updated last year
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated last year
- Software for clustering de novo assembled transcripts and counting overlapping reads☆74Updated 3 years ago
- ☆78Updated 11 years ago
- A catalogue of available long read sequencing data analysis tools☆80Updated last month
- An awk-like VCF parser☆56Updated last year
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 5 months ago
- A read extraction and realignment tool for next generation sequencing data☆103Updated 2 years ago
- Evolutionary Transcriptomics with R☆46Updated last week
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆31Updated 4 years ago
- Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago
- A collection of command line tools for working with sequencing data☆52Updated 3 weeks ago
- R package designed to simplify structural variant analysis☆73Updated 3 years ago
- RetroSeq is a bioinformatics tool that searches for mobile element insertions from aligned reads in a BAM file and a library of reference…☆67Updated 2 years ago
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs☆52Updated last month
- Updated Kraken DB install scripts to cope with new-ish NCBI structure☆48Updated 8 years ago
- A software for calculating telomere length☆72Updated 7 years ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- Nanopore data analysis in R☆40Updated 2 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆51Updated 3 years ago
- adds sample names and read-group (RG) tags to BAM alignments☆51Updated 4 years ago
- Scallop is a reference-based transcriptome assembler for RNA-seq☆91Updated 4 years ago
- An NGS read trimming tool that is specific, sensitive, and speedy. (production)☆125Updated 5 months ago