Maximum likelihood demultiplexing
☆52Feb 14, 2025Updated last year
Alternatives and similar repositories for deML
Users that are interested in deML are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Scripts to visualize the thumbnail images from illumina sequencing machines☆14Mar 16, 2016Updated 10 years ago
- A Demultiplexing Tool for Illumina Sequencers☆10Sep 27, 2016Updated 9 years ago
- A sequence demultiplexer for the Illumina HiSeq technology☆21Apr 29, 2013Updated 13 years ago
- Informatic Sequence Classification Trees☆15Jan 23, 2026Updated 3 months ago
- ☆66Dec 9, 2020Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Jan 8, 2016Updated 10 years ago
- Exploring microbial patterns through subtle nucleotide variation within 16S rRNA gene tag sequences of closely related taxa☆41Jun 24, 2024Updated last year
- Multiplex Primer Design☆21Oct 30, 2020Updated 5 years ago
- SRAToolkit has been REPLACED - see README☆39Aug 29, 2016Updated 9 years ago
- GPU-accelerated DNA barcode classification☆13Jan 2, 2025Updated last year
- abawaca is a binning program for metagenomics☆13May 20, 2017Updated 8 years ago
- LaTeX template to create a compiled PDF (text+figures) e.g. for bioRxiv.org☆20Apr 19, 2016Updated 10 years ago
- kaamer - protein identification based on amino acid kmers☆12Mar 7, 2023Updated 3 years ago
- ☆13Apr 22, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- An approximate sequence pattern matcher for FASTQ/FASTA files.☆32Jan 22, 2016Updated 10 years ago
- Linear-time, low-memory construction of variation graphs☆20Feb 3, 2020Updated 6 years ago
- A method of assessing sequence complexity based on kmer frequencies☆33Apr 9, 2018Updated 8 years ago
- ☆29Jun 12, 2024Updated last year
- full taxonomer cython repository☆22Dec 1, 2019Updated 6 years ago
- Deblur is a greedy deconvolution algorithm based on known read error profiles.☆99Mar 8, 2025Updated last year
- NextSeq specific bcl2fastq2 wrapper.☆56Apr 15, 2021Updated 5 years ago
- R functions underlying ExpressAnalyst☆14Apr 21, 2026Updated last week
- A false-positive filter for variants called from massively parallel sequencing☆29May 30, 2017Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This is a simple introductory tutorial to help you get started with using BEAST2 and its accomplices.☆11Jul 8, 2025Updated 9 months ago
- R package supporting interactive data access on BOLD☆22Oct 1, 2025Updated 6 months ago
- A software for discovery, genotyping and characterization of structural variants☆22Sep 11, 2024Updated last year
- Visualisation and prioritisation of genomic variants from human exome sequencing projects☆13Apr 23, 2019Updated 7 years ago
- Proof of concept to use ansible + Lmod to deploy a bioinformatics server☆25Jun 5, 2025Updated 10 months ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…☆34Mar 18, 2014Updated 12 years ago
- Web application to collect and visualise data across multiple MultiQC runs.☆94Dec 13, 2024Updated last year
- From genomes to phenotypes: Traitar, the microbial trait analyzer☆67Aug 12, 2019Updated 6 years ago
- Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline☆57Jan 24, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- High-performance error correction for Illumina resequencing data☆74May 31, 2016Updated 9 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆94Dec 24, 2025Updated 4 months ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆18Jun 28, 2024Updated last year
- A model context protocol (MCP) server for the EBI Ontology Lookup Service (OLS)☆24Jul 16, 2025Updated 9 months ago
- Simple Python program to perform codon optimization or heterology calculations.☆12Apr 13, 2021Updated 5 years ago
- Phylogeny-based Contamination Detection in Mitochondrial and Whole-Genome Sequencing Studies☆17Jun 14, 2023Updated 2 years ago
- Mapping-free variant caller for short-read Illumina data☆20Apr 2, 2020Updated 6 years ago