hms-dbmi / scwLinks
HSCI/Catalyst Single-cell RNA-Seq Workshop
☆19Updated 6 years ago
Alternatives and similar repositories for scw
Users that are interested in scw are comparing it to the libraries listed below
Sorting:
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- pipelines to process scRNA-seq data☆12Updated 4 years ago
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- kallisto index tag extractor☆20Updated 6 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆47Updated 2 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Updated 8 months ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆24Updated 6 years ago
- Exon-Intron Split Analysis (EISA) in R☆17Updated last month
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆24Updated 5 months ago
- Bead-based single-cell atac processing☆33Updated 4 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 2 months ago
- An R-based interface for loom files☆67Updated 5 years ago
- 🧬 🦀 A fast and efficient tool to perform a genome wide Single cell Chromatin State Analysis using multimodal histone modification data.…☆29Updated 4 years ago
- ☆55Updated 9 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Code used for the single-cell RNA-Seq batch effects paper☆10Updated 8 years ago
- An r package that works as a wrapper to homologene☆47Updated 2 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆40Updated last year
- R package for haplotype phasing using single-cell RNA-seq data☆13Updated 8 years ago
- ☆14Updated 6 years ago
- Identify and correct invalid gene symbols☆60Updated last year
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago