hms-dbmi / scwLinks
HSCI/Catalyst Single-cell RNA-Seq Workshop
☆19Updated 6 years ago
Alternatives and similar repositories for scw
Users that are interested in scw are comparing it to the libraries listed below
Sorting:
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- kallisto index tag extractor☆20Updated 6 years ago
- ☆55Updated 8 months ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated 2 years ago
- ☆28Updated 6 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- R/Bioconductor package to interactively explore single cell clusters at multiple resolutions☆10Updated 3 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Updated 7 months ago
- post-clustering differential expression test☆36Updated 6 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- A R package for Grade of Membership model and Visualization of counts data:☆32Updated 4 years ago
- ☆43Updated 4 years ago
- Inference of switch-like differential expression along single-cell trajectories☆21Updated 8 years ago
- pipelines to process scRNA-seq data☆12Updated 4 years ago
- An r package that works as a wrapper to homologene☆46Updated last year
- An R-based interface for loom files☆67Updated 5 years ago
- Algorithm for the inference of cell types from single-cell RNA-seq data.☆45Updated 9 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated last month
- Identify and correct invalid gene symbols☆59Updated 11 months ago
- ☆55Updated 4 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- Scripts to run and benchmark scRNA-seq cell cluster labeling methods☆48Updated 5 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated 2 months ago