Alternatives and similar repositories for rBLAST:

Users that are interested in rBLAST are comparing it to the libraries listed below

• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆100Updated 2 weeks ago
• jokergoo / EnrichedHeatmap
  make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.
  ☆190Updated last year
• omarwagih / ggseqlogo
  Publication-quality sequence logos in R
  ☆211Updated 5 months ago
• FrederickHuangLin / ANCOMBC
  Differential abundance (DA) and correlation analyses for microbial absolute abundance data
  ☆120Updated this week
• tpq / propr
  [OFFICIAL] [CoDA] An R package to calculate proportionality and other measures for compositional data
  ☆71Updated last month
• microbiome / mia
  Microbiome analysis
  ☆52Updated this week
• kevinblighe / E-MTAB-6141
  Data from Lewis, Barnes, Blighe et al., Cell Rep. 2019 Aug 27; 28(9): 2455–2470.e5.
  ☆119Updated 4 years ago
• stephenturner / annotables
  R data package for annotating/converting Gene IDs
  ☆163Updated 2 years ago
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆143Updated last week
• drostlab / orthologr
  Genome wide orthology inference and dNdS estimation
  ☆90Updated last year
• yiluheihei / microbiomeMarker
  R package for microbiome biomarker discovery
  ☆177Updated last month
• statdivlab / corncob
  Count Regression for Correlated Observations with the Beta-binomial
  ☆106Updated 6 months ago
• jbisanz / qiime2R
  Import qiime2 artifacts to R
  ☆167Updated 3 months ago
• YuLab-SMU / ggtreeExtra
  Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
  ☆91Updated 4 months ago
• waldronlab / lefser
  R implementation of the LEfSe method
  ☆56Updated last month
• showteeth / ggcoverage
  Visualize and annotate genomic coverage with ggplot2
  ☆256Updated last month
• dzhang32 / ggtranscript
  Visualizing transcript structure and annotation using ggplot2
  ☆149Updated 6 months ago
• david-barnett / microViz
  R package for microbiome data visualization and statistics. Uses phyloseq, vegan and the tidyverse. Docker image available.
  ☆114Updated 2 months ago
• microsud / Tools-Microbiome-Analysis
  A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
  ☆113Updated last year
• ssayols / rrvgo
  Reduce + Visualize Gene Ontology
  ☆25Updated 4 months ago
• waldronlab / curatedMetagenomicData
  Curated Metagenomic Data of the Human Microbiome
  ☆129Updated last month
• pinin4fjords / shinyngs
  Shiny apps for NGS etc based on reusable components created using Shiny modules
  ☆76Updated 3 weeks ago
• thelovelab / rnaseqGene
  RNA-seq workflow: exploratory analysis and differential expression
  ☆76Updated last year
• PF2-pasteur-fr / SARTools
  Statistical Analysis of RNA-Seq Tools
  ☆107Updated last year
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆122Updated this week
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆64Updated 10 months ago
• lch14forever / microbiomeViz
  Visualize microbiome data with black magic ggtree
  ☆67Updated 4 years ago
• TickingClock1992 / RIdeogram
  ☆170Updated 4 years ago
• HCBravoLab / metagenomeSeq
  Statistical analysis for sparse high-throughput sequencing
  ☆69Updated 3 months ago
• ropensci / tidyqpcr
  quantitative PCR analysis in the tidyverse
  ☆54Updated 9 months ago